Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Gm25239-201ENSMUST00000174915 86 ntBASIC39.15■■■■□ 3.86
Usp2O88623 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.15■■■■□ 3.38
Usp2O88623 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Usp2O88623 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Usp2O88623 Gm15042-201ENSMUST00000120212 883 ntBASIC34.34■■■■□ 3.09
Usp2O88623 Gm24109-201ENSMUST00000175489 103 ntBASIC33.89■■■■□ 3.02
Usp2O88623 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Usp2O88623 Gm15045-201ENSMUST00000117359 883 ntBASIC33.65■■■□□ 2.98
Usp2O88623 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.37■■■□□ 2.93
Usp2O88623 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Usp2O88623 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
Usp2O88623 Gm23366-201ENSMUST00000175022 89 ntBASIC32.67■■■□□ 2.82
Usp2O88623 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Usp2O88623 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Usp2O88623 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Usp2O88623 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.17■■■□□ 2.74
Usp2O88623 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Usp2O88623 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Usp2O88623 Psd-208ENSMUST00000224556 2034 ntBASIC31.89■■■□□ 2.7
Usp2O88623 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Usp2O88623 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
Usp2O88623 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Usp2O88623 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Usp2O88623 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
Usp2O88623 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Usp2O88623 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.53■■■□□ 2.64
Usp2O88623 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Usp2O88623 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.42■■■□□ 2.62
Usp2O88623 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.4■■■□□ 2.62
Usp2O88623 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Usp2O88623 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.12■■■□□ 2.57
Usp2O88623 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Usp2O88623 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Usp2O88623 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Usp2O88623 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.9■■■□□ 2.54
Usp2O88623 Gm25238-201ENSMUST00000174914 89 ntBASIC30.88■■■□□ 2.53
Usp2O88623 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Usp2O88623 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Usp2O88623 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Usp2O88623 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.73■■■□□ 2.51
Usp2O88623 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Usp2O88623 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Usp2O88623 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Usp2O88623 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Usp2O88623 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.28■■■□□ 2.44
Usp2O88623 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Usp2O88623 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Usp2O88623 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
Usp2O88623 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.17■■■□□ 2.42
Usp2O88623 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.17■■■□□ 2.42
Usp2O88623 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Usp2O88623 Gm27325-201ENSMUST00000175467 74 ntBASIC30.12■■■□□ 2.41
Usp2O88623 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Usp2O88623 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Usp2O88623 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Usp2O88623 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Usp2O88623 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.83■■■□□ 2.37
Usp2O88623 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.8■■■□□ 2.36
Usp2O88623 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.76■■■□□ 2.35
Usp2O88623 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Usp2O88623 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Usp2O88623 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Usp2O88623 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Usp2O88623 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.65■■■□□ 2.34
Usp2O88623 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Usp2O88623 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.62■■■□□ 2.33
Usp2O88623 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Usp2O88623 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Usp2O88623 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Usp2O88623 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Usp2O88623 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Usp2O88623 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Usp2O88623 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
Usp2O88623 Rab21-202ENSMUST00000218831 843 ntBASIC29.45■■■□□ 2.31
Usp2O88623 Gm25262-201ENSMUST00000174934 133 ntBASIC29.41■■■□□ 2.3
Usp2O88623 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Usp2O88623 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.34■■■□□ 2.29
Usp2O88623 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.32■■■□□ 2.28
Usp2O88623 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.28■■■□□ 2.28
Usp2O88623 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Usp2O88623 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.27■■■□□ 2.28
Usp2O88623 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Usp2O88623 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Usp2O88623 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Usp2O88623 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.16■■■□□ 2.26
Usp2O88623 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Usp2O88623 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Usp2O88623 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Usp2O88623 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Usp2O88623 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.01■■■□□ 2.23
Usp2O88623 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Usp2O88623 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Usp2O88623 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp2O88623 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Usp2O88623 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.88■■■□□ 2.21
Usp2O88623 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Usp2O88623 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.84■■■□□ 2.21
Usp2O88623 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Usp2O88623 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Usp2O88623 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms