Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC8.34□□□□□ -1.07
Syne1Q6ZWR6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Syne1Q6ZWR6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Syne1Q6ZWR6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Syne1Q6ZWR6 Cap2-205ENSMUST00000225824 1634 ntBASIC8.34□□□□□ -1.07
Syne1Q6ZWR6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Syne1Q6ZWR6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Syne1Q6ZWR6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Syne1Q6ZWR6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC8.33□□□□□ -1.08
Syne1Q6ZWR6 Gm6345-201ENSMUST00000180378 1691 ntBASIC8.33□□□□□ -1.08
Syne1Q6ZWR6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Syne1Q6ZWR6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Syne1Q6ZWR6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC8.31□□□□□ -1.08
Syne1Q6ZWR6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC8.3□□□□□ -1.08
Syne1Q6ZWR6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Syne1Q6ZWR6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Syne1Q6ZWR6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Syne1Q6ZWR6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Syne1Q6ZWR6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Syne1Q6ZWR6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Syne1Q6ZWR6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Syne1Q6ZWR6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Syne1Q6ZWR6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
Syne1Q6ZWR6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC8.27□□□□□ -1.09
Syne1Q6ZWR6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Syne1Q6ZWR6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Syne1Q6ZWR6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Syne1Q6ZWR6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Syne1Q6ZWR6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Syne1Q6ZWR6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC8.25□□□□□ -1.09
Syne1Q6ZWR6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Syne1Q6ZWR6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Syne1Q6ZWR6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC8.24□□□□□ -1.09
Syne1Q6ZWR6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC8.24□□□□□ -1.09
Syne1Q6ZWR6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Syne1Q6ZWR6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Syne1Q6ZWR6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 Gm30023-201ENSMUST00000197970 889 ntBASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Syne1Q6ZWR6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Syne1Q6ZWR6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC8.22□□□□□ -1.09
Syne1Q6ZWR6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Syne1Q6ZWR6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Syne1Q6ZWR6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Syne1Q6ZWR6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Syne1Q6ZWR6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Syne1Q6ZWR6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Syne1Q6ZWR6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
Syne1Q6ZWR6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Syne1Q6ZWR6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC8.21□□□□□ -1.09
Syne1Q6ZWR6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC8.21□□□□□ -1.1
Syne1Q6ZWR6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC8.21□□□□□ -1.1
Syne1Q6ZWR6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Syne1Q6ZWR6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Syne1Q6ZWR6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Syne1Q6ZWR6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Syne1Q6ZWR6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms