Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tnrc6aQ3UHK8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.09■■□□□ 1.29
Tnrc6aQ3UHK8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnrc6aQ3UHK8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.09■■□□□ 1.29
Tnrc6aQ3UHK8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tnrc6aQ3UHK8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.09■■□□□ 1.29
Tnrc6aQ3UHK8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tnrc6aQ3UHK8 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tnrc6aQ3UHK8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Tnrc6aQ3UHK8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tnrc6aQ3UHK8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.06■■□□□ 1.28
Tnrc6aQ3UHK8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tnrc6aQ3UHK8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.05■■□□□ 1.28
Tnrc6aQ3UHK8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.04■■□□□ 1.28
Tnrc6aQ3UHK8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.04■■□□□ 1.28
Tnrc6aQ3UHK8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tnrc6aQ3UHK8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tnrc6aQ3UHK8 Gm11599-201ENSMUST00000118720 878 ntBASIC23.02■■□□□ 1.28
Tnrc6aQ3UHK8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Tnrc6aQ3UHK8 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc6aQ3UHK8 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc6aQ3UHK8 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tnrc6aQ3UHK8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23■■□□□ 1.27
Tnrc6aQ3UHK8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Tnrc6aQ3UHK8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23■■□□□ 1.27
Tnrc6aQ3UHK8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23■■□□□ 1.27
Tnrc6aQ3UHK8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.99■■□□□ 1.27
Tnrc6aQ3UHK8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tnrc6aQ3UHK8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.97■■□□□ 1.27
Tnrc6aQ3UHK8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tnrc6aQ3UHK8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Tnrc6aQ3UHK8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tnrc6aQ3UHK8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Tnrc6aQ3UHK8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.96■■□□□ 1.27
Tnrc6aQ3UHK8 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Tnrc6aQ3UHK8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.95■■□□□ 1.26
Tnrc6aQ3UHK8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.95■■□□□ 1.26
Tnrc6aQ3UHK8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.95■■□□□ 1.26
Tnrc6aQ3UHK8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tnrc6aQ3UHK8 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tnrc6aQ3UHK8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Tnrc6aQ3UHK8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.94■■□□□ 1.26
Tnrc6aQ3UHK8 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.94■■□□□ 1.26
Tnrc6aQ3UHK8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tnrc6aQ3UHK8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Tnrc6aQ3UHK8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tnrc6aQ3UHK8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tnrc6aQ3UHK8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Tnrc6aQ3UHK8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tnrc6aQ3UHK8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.88■■□□□ 1.25
Tnrc6aQ3UHK8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tnrc6aQ3UHK8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Tnrc6aQ3UHK8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Tnrc6aQ3UHK8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Tnrc6aQ3UHK8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Tnrc6aQ3UHK8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Tnrc6aQ3UHK8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Tnrc6aQ3UHK8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Tnrc6aQ3UHK8 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Tnrc6aQ3UHK8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Tnrc6aQ3UHK8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Tnrc6aQ3UHK8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.83■■□□□ 1.24
Tnrc6aQ3UHK8 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Tnrc6aQ3UHK8 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Tnrc6aQ3UHK8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.82■■□□□ 1.24
Tnrc6aQ3UHK8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Tnrc6aQ3UHK8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.81■■□□□ 1.24
Tnrc6aQ3UHK8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Tnrc6aQ3UHK8 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tnrc6aQ3UHK8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Tnrc6aQ3UHK8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Tnrc6aQ3UHK8 Mir6538-201ENSMUST00000183713 110 ntBASIC22.81■■□□□ 1.24
Tnrc6aQ3UHK8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Tnrc6aQ3UHK8 Gm11175-201ENSMUST00000116172 543 ntBASIC22.8■■□□□ 1.24
Tnrc6aQ3UHK8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Tnrc6aQ3UHK8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tnrc6aQ3UHK8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tnrc6aQ3UHK8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tnrc6aQ3UHK8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tnrc6aQ3UHK8 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tnrc6aQ3UHK8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tnrc6aQ3UHK8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tnrc6aQ3UHK8 Zxda-201ENSMUST00000117281 2621 ntBASIC22.77■■□□□ 1.24
Tnrc6aQ3UHK8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tnrc6aQ3UHK8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tnrc6aQ3UHK8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Tnrc6aQ3UHK8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tnrc6aQ3UHK8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.76■■□□□ 1.23
Tnrc6aQ3UHK8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Tnrc6aQ3UHK8 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.75■■□□□ 1.23
Tnrc6aQ3UHK8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Tnrc6aQ3UHK8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tnrc6aQ3UHK8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Tnrc6aQ3UHK8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Tnrc6aQ3UHK8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Tnrc6aQ3UHK8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Tnrc6aQ3UHK8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Tnrc6aQ3UHK8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Tnrc6aQ3UHK8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Tnrc6aQ3UHK8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.72■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms