Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 NAP1YKR048C 1254 nt10.19□□□□□ -0.78
UFD2P54860 YOR325WYOR325W 474 nt10.19□□□□□ -0.78
UFD2P54860 YFR036W-AYFR036W-A 651 nt10.18□□□□□ -0.78
UFD2P54860 RRT8YOL048C 1029 nt10.18□□□□□ -0.78
UFD2P54860 SPT20YOL148C 1815 nt10.18□□□□□ -0.78
UFD2P54860 ILV3YJR016C 1758 nt10.17□□□□□ -0.78
UFD2P54860 CCT2YIL142W 1584 nt10.17□□□□□ -0.78
UFD2P54860 ERG13YML126C 1476 nt10.17□□□□□ -0.78
UFD2P54860 NIF3YGL221C 867 nt10.16□□□□□ -0.78
UFD2P54860 SPS100YHR139C 981 nt10.16□□□□□ -0.78
UFD2P54860 ADE8YDR408C 645 nt10.15□□□□□ -0.78
UFD2P54860 YJL064WYJL064W 396 nt10.15□□□□□ -0.78
UFD2P54860 OPI10YOL032W 741 nt10.15□□□□□ -0.78
UFD2P54860 PUP1YOR157C 786 nt10.15□□□□□ -0.78
UFD2P54860 PAR32YDL173W 888 nt10.14□□□□□ -0.79
UFD2P54860 AIM1YAL046C 357 nt10.12□□□□□ -0.79
UFD2P54860 ABZ2YMR289W 1125 nt10.12□□□□□ -0.79
UFD2P54860 PAU19YMR325W 375 nt10.11□□□□□ -0.79
UFD2P54860 AI5_BETAQ0075 1065 nt10.1□□□□□ -0.79
UFD2P54860 HEL2YDR266C 1920 nt10.08□□□□□ -0.8
UFD2P54860 TOM20YGR082W 552 nt10.08□□□□□ -0.8
UFD2P54860 LSB6YJL100W 1824 nt10.07□□□□□ -0.8
UFD2P54860 TVP23YDR084C 600 nt10.07□□□□□ -0.8
UFD2P54860 YDR510C-AYDR510C-A 117 nt10.07□□□□□ -0.8
UFD2P54860 SAC7YDR389W 1965 nt10.06□□□□□ -0.8
UFD2P54860 YJR114WYJR114W 393 nt10.06□□□□□ -0.8
UFD2P54860 BET2YPR176C 978 nt10.06□□□□□ -0.8
UFD2P54860 OPI3YJR073C 621 nt10.05□□□□□ -0.8
UFD2P54860 YPL041CYPL041C 624 nt10.04□□□□□ -0.8
UFD2P54860 COG1YGL223C 1254 nt10.03□□□□□ -0.8
UFD2P54860 ENT4YLL038C 744 nt10.03□□□□□ -0.8
UFD2P54860 CDD1YLR245C 429 nt10.02□□□□□ -0.81
UFD2P54860 MUP1YGR055W 1725 nt10.02□□□□□ -0.81
UFD2P54860 DIG1YPL049C 1359 nt10.01□□□□□ -0.81
UFD2P54860 IGD1YFR017C 588 nt10□□□□□ -0.81
UFD2P54860 NAS2YIL007C 663 nt10□□□□□ -0.81
UFD2P54860 YLR046CYLR046C 813 nt9.99□□□□□ -0.81
UFD2P54860 QDR2YIL121W 1629 nt9.99□□□□□ -0.81
UFD2P54860 FTH1YBR207W 1398 nt9.99□□□□□ -0.81
UFD2P54860 ARO8YGL202W 1503 nt9.98□□□□□ -0.81
UFD2P54860 YNR064CYNR064C 873 nt9.97□□□□□ -0.81
UFD2P54860 SLG1YOR008C 1137 nt9.96□□□□□ -0.82
UFD2P54860 KRE1YNL322C 942 nt9.95□□□□□ -0.82
UFD2P54860 TIP1YBR067C 633 nt9.95□□□□□ -0.82
UFD2P54860 RIM8YGL045W 1629 nt9.95□□□□□ -0.82
UFD2P54860 HOL1YNR055C 1761 nt9.93□□□□□ -0.82
UFD2P54860 YGL114WYGL114W 2178 nt9.93□□□□□ -0.82
UFD2P54860 THP3YPR045C 1413 nt9.92□□□□□ -0.82
UFD2P54860 ENO2YHR174W 1314 nt9.92□□□□□ -0.82
UFD2P54860 SPE2YOL052C 1191 nt9.92□□□□□ -0.82
UFD2P54860 COQ8YGL119W 1506 nt9.92□□□□□ -0.82
UFD2P54860 AMF1YOR378W 1548 nt9.92□□□□□ -0.82
UFD2P54860 DLD3YEL071W 1491 nt9.91□□□□□ -0.82
UFD2P54860 KES1YPL145C 1305 nt9.91□□□□□ -0.82
UFD2P54860 ITR2YOL103W 1830 nt9.91□□□□□ -0.82
UFD2P54860 tA(AGC)DtA(AGC)D 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)FtA(AGC)F 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)GtA(AGC)G 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)HtA(AGC)H 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)JtA(AGC)J 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)K1tA(AGC)K1 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)K2tA(AGC)K2 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)LtA(AGC)L 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)M1tA(AGC)M1 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)M2tA(AGC)M2 73 nt9.9□□□□□ -0.82
UFD2P54860 tA(AGC)PtA(AGC)P 73 nt9.9□□□□□ -0.82
UFD2P54860 PCP1YGR101W 1041 nt9.9□□□□□ -0.82
UFD2P54860 TIM44YIL022W 1296 nt9.9□□□□□ -0.82
UFD2P54860 ELO1YJL196C 933 nt9.9□□□□□ -0.82
UFD2P54860 TPC1YGR096W 945 nt9.89□□□□□ -0.83
UFD2P54860 YTH1YPR107C 627 nt9.89□□□□□ -0.83
UFD2P54860 YNL067W-AYNL067W-A 147 nt9.88□□□□□ -0.83
UFD2P54860 GID8YMR135C 1368 nt9.88□□□□□ -0.83
UFD2P54860 BUR6YER159C 429 nt9.87□□□□□ -0.83
UFD2P54860 FSH2YMR222C 672 nt9.87□□□□□ -0.83
UFD2P54860 IPL1YPL209C 1104 nt9.87□□□□□ -0.83
UFD2P54860 SGA1YIL099W 1650 nt9.86□□□□□ -0.83
UFD2P54860 YHR219WYHR219W 1875 nt9.85□□□□□ -0.83
UFD2P54860 RSC4YKR008W 1878 nt9.85□□□□□ -0.83
UFD2P54860 KEL3YPL263C 1956 nt9.84□□□□□ -0.83
UFD2P54860 PHB2YGR231C 933 nt9.84□□□□□ -0.83
UFD2P54860 FLX1YIL134W 936 nt9.84□□□□□ -0.83
UFD2P54860 ADH3YMR083W 1128 nt9.84□□□□□ -0.83
UFD2P54860 SWT21YNL187W 1074 nt9.84□□□□□ -0.83
UFD2P54860 SFL1YOR140W 2301 nt9.84□□□□□ -0.83
UFD2P54860 MRS6YOR370C 1812 nt9.82□□□□□ -0.84
UFD2P54860 ZAP1YJL056C 2643 nt9.82□□□□□ -0.84
UFD2P54860 YCR025CYCR025C 411 nt9.82□□□□□ -0.84
UFD2P54860 LEU2YCL018W 1095 nt9.82□□□□□ -0.84
UFD2P54860 SUV3YPL029W 2214 nt9.81□□□□□ -0.84
UFD2P54860 YKL133CYKL133C 1392 nt9.8□□□□□ -0.84
UFD2P54860 LSR1LSR1 1175 nt9.8□□□□□ -0.84
UFD2P54860 NAM8YHR086W 1572 nt9.8□□□□□ -0.84
UFD2P54860 YMR265CYMR265C 1386 nt9.79□□□□□ -0.84
UFD2P54860 VMA11YPL234C 495 nt9.79□□□□□ -0.84
UFD2P54860 NAS6YGR232W 687 nt9.78□□□□□ -0.84
UFD2P54860 HAP5YOR358W 729 nt9.78□□□□□ -0.84
UFD2P54860 MAE1YKL029C 2010 nt9.78□□□□□ -0.84
UFD2P54860 MET1YKR069W 1782 nt9.78□□□□□ -0.84
UFD2P54860 ACO2YJL200C 2370 nt9.77□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms