Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 DAK2YFL053W 1776 nt10.33□□□□□ -0.76
MSH4P40965 YMR209CYMR209C 1374 nt10.3□□□□□ -0.76
MSH4P40965 HEM13YDR044W 987 nt10.3□□□□□ -0.76
MSH4P40965 APS2YJR058C 444 nt10.3□□□□□ -0.76
MSH4P40965 OSH7YHR001W 1314 nt10.3□□□□□ -0.76
MSH4P40965 ACH1YBL015W 1581 nt10.28□□□□□ -0.76
MSH4P40965 LSM5YER146W 282 nt10.28□□□□□ -0.76
MSH4P40965 MET8YBR213W 825 nt10.28□□□□□ -0.76
MSH4P40965 YIL100C-AYIL100C-A 339 nt10.27□□□□□ -0.77
MSH4P40965 DDI1YER143W 1287 nt10.26□□□□□ -0.77
MSH4P40965 YJR114WYJR114W 393 nt10.26□□□□□ -0.77
MSH4P40965 RIB1YBL033C 1038 nt10.26□□□□□ -0.77
MSH4P40965 TMA23YMR269W 636 nt10.26□□□□□ -0.77
MSH4P40965 HXK1YFR053C 1458 nt10.24□□□□□ -0.77
MSH4P40965 SOL2YCR073W-A 948 nt10.24□□□□□ -0.77
MSH4P40965 SOD2YHR008C 702 nt10.22□□□□□ -0.77
MSH4P40965 KRE1YNL322C 942 nt10.22□□□□□ -0.77
MSH4P40965 NIF3YGL221C 867 nt10.21□□□□□ -0.77
MSH4P40965 COQ8YGL119W 1506 nt10.21□□□□□ -0.78
MSH4P40965 TAT2YOL020W 1779 nt10.21□□□□□ -0.78
MSH4P40965 YIA6YIL006W 1122 nt10.2□□□□□ -0.78
MSH4P40965 GAL2YLR081W 1725 nt10.2□□□□□ -0.78
MSH4P40965 OPI10YOL032W 741 nt10.2□□□□□ -0.78
MSH4P40965 ARO8YGL202W 1503 nt10.19□□□□□ -0.78
MSH4P40965 VPS62YGR141W 1404 nt10.19□□□□□ -0.78
MSH4P40965 ALD5YER073W 1563 nt10.18□□□□□ -0.78
MSH4P40965 CCT2YIL142W 1584 nt10.18□□□□□ -0.78
MSH4P40965 UGP1YKL035W 1500 nt10.18□□□□□ -0.78
MSH4P40965 MAS1YLR163C 1389 nt10.18□□□□□ -0.78
MSH4P40965 IGD1YFR017C 588 nt10.18□□□□□ -0.78
MSH4P40965 IMO32YGR031W 1029 nt10.18□□□□□ -0.78
MSH4P40965 ERG6YML008C 1152 nt10.18□□□□□ -0.78
MSH4P40965 LSB6YJL100W 1824 nt10.18□□□□□ -0.78
MSH4P40965 YDR455CYDR455C 309 nt10.17□□□□□ -0.78
MSH4P40965 SPS100YHR139C 981 nt10.17□□□□□ -0.78
MSH4P40965 PAU21YOR394W 495 nt10.17□□□□□ -0.78
MSH4P40965 PAU22YPL282C 495 nt10.17□□□□□ -0.78
MSH4P40965 DTR1YBR180W 1719 nt10.15□□□□□ -0.78
MSH4P40965 YCR025CYCR025C 411 nt10.14□□□□□ -0.79
MSH4P40965 YDL086WYDL086W 822 nt10.14□□□□□ -0.79
MSH4P40965 YCP4YCR004C 744 nt10.13□□□□□ -0.79
MSH4P40965 ADE8YDR408C 645 nt10.12□□□□□ -0.79
MSH4P40965 ASP3-1YLR155C 1089 nt10.12□□□□□ -0.79
MSH4P40965 ASP3-2YLR157C 1089 nt10.12□□□□□ -0.79
MSH4P40965 ASP3-3YLR158C 1089 nt10.12□□□□□ -0.79
MSH4P40965 ASP3-4YLR160C 1089 nt10.12□□□□□ -0.79
MSH4P40965 PSD1YNL169C 1503 nt10.11□□□□□ -0.79
MSH4P40965 ZAP1YJL056C 2643 nt10.11□□□□□ -0.79
MSH4P40965 SAM50YNL026W 1455 nt10.1□□□□□ -0.79
MSH4P40965 KES1YPL145C 1305 nt10.1□□□□□ -0.79
MSH4P40965 SGA1YIL099W 1650 nt10.1□□□□□ -0.79
MSH4P40965 BET2YPR176C 978 nt10.1□□□□□ -0.79
MSH4P40965 YFR036W-AYFR036W-A 651 nt10.09□□□□□ -0.79
MSH4P40965 RRT8YOL048C 1029 nt10.08□□□□□ -0.8
MSH4P40965 IPL1YPL209C 1104 nt10.08□□□□□ -0.8
MSH4P40965 ARO7YPR060C 771 nt10.08□□□□□ -0.8
MSH4P40965 RFC1YOR217W 2586 nt10.07□□□□□ -0.8
MSH4P40965 ERG13YML126C 1476 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)DtA(AGC)D 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)FtA(AGC)F 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)GtA(AGC)G 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)HtA(AGC)H 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)JtA(AGC)J 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)K1tA(AGC)K1 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)K2tA(AGC)K2 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)LtA(AGC)L 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)M1tA(AGC)M1 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)M2tA(AGC)M2 73 nt10.07□□□□□ -0.8
MSH4P40965 tA(AGC)PtA(AGC)P 73 nt10.07□□□□□ -0.8
MSH4P40965 HIS2YFR025C 1008 nt10.07□□□□□ -0.8
MSH4P40965 ABZ2YMR289W 1125 nt10.07□□□□□ -0.8
MSH4P40965 SPE2YOL052C 1191 nt10.06□□□□□ -0.8
MSH4P40965 TOK1YJL093C 2076 nt10.05□□□□□ -0.8
MSH4P40965 AIM1YAL046C 357 nt10.04□□□□□ -0.8
MSH4P40965 CYT1YOR065W 930 nt10.04□□□□□ -0.8
MSH4P40965 NAS2YIL007C 663 nt10.03□□□□□ -0.8
MSH4P40965 ENO2YHR174W 1314 nt10.02□□□□□ -0.81
MSH4P40965 TVP23YDR084C 600 nt10□□□□□ -0.81
MSH4P40965 POP2YNR052C 1302 nt9.99□□□□□ -0.81
MSH4P40965 FLX1YIL134W 936 nt9.98□□□□□ -0.81
MSH4P40965 THP3YPR045C 1413 nt9.98□□□□□ -0.81
MSH4P40965 RSC4YKR008W 1878 nt9.98□□□□□ -0.81
MSH4P40965 MTO1YGL236C 2010 nt9.97□□□□□ -0.81
MSH4P40965 SAC7YDR389W 1965 nt9.97□□□□□ -0.81
MSH4P40965 QDR2YIL121W 1629 nt9.96□□□□□ -0.81
MSH4P40965 MCM5YLR274W 2328 nt9.96□□□□□ -0.81
MSH4P40965 LYS20YDL182W 1287 nt9.96□□□□□ -0.82
MSH4P40965 OPI3YJR073C 621 nt9.95□□□□□ -0.82
MSH4P40965 ENT4YLL038C 744 nt9.95□□□□□ -0.82
MSH4P40965 CDD1YLR245C 429 nt9.95□□□□□ -0.82
MSH4P40965 DIG1YPL049C 1359 nt9.94□□□□□ -0.82
MSH4P40965 YER152W-AYER152W-A 567 nt9.94□□□□□ -0.82
MSH4P40965 MOB1YIL106W 945 nt9.94□□□□□ -0.82
MSH4P40965 TPC1YGR096W 945 nt9.93□□□□□ -0.82
MSH4P40965 ADH3YMR083W 1128 nt9.93□□□□□ -0.82
MSH4P40965 GID8YMR135C 1368 nt9.92□□□□□ -0.82
MSH4P40965 YOR072WYOR072W 315 nt9.92□□□□□ -0.82
MSH4P40965 YLR046CYLR046C 813 nt9.91□□□□□ -0.82
MSH4P40965 FSH2YMR222C 672 nt9.91□□□□□ -0.82
MSH4P40965 MRS6YOR370C 1812 nt9.91□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms