Protein–RNA interactions for Protein: P18480

SNF5, SWI/SNF chromatin-remodeling complex subunit SNF5, yeastyeast

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF5P18480 OYE2YHR179W 1203 nt8.55□□□□□ -1.04
SNF5P18480 SWM1YDR260C 513 nt8.54□□□□□ -1.04
SNF5P18480 BUD20YLR074C 501 nt8.54□□□□□ -1.04
SNF5P18480 YNL024CYNL024C 741 nt8.54□□□□□ -1.04
SNF5P18480 FUB1YCR076C 753 nt8.53□□□□□ -1.04
SNF5P18480 SHY1YGR112W 1170 nt8.53□□□□□ -1.04
SNF5P18480 CDD1YLR245C 429 nt8.53□□□□□ -1.04
SNF5P18480 EAF3YPR023C 1206 nt8.53□□□□□ -1.04
SNF5P18480 IPL1YPL209C 1104 nt8.51□□□□□ -1.05
SNF5P18480 YGL114WYGL114W 2178 nt8.51□□□□□ -1.05
SNF5P18480 RIM8YGL045W 1629 nt8.51□□□□□ -1.05
SNF5P18480 RPC82YPR190C 1965 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)DtA(AGC)D 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)FtA(AGC)F 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)GtA(AGC)G 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)HtA(AGC)H 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)JtA(AGC)J 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)K1tA(AGC)K1 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)K2tA(AGC)K2 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)LtA(AGC)L 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)M1tA(AGC)M1 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)M2tA(AGC)M2 73 nt8.5□□□□□ -1.05
SNF5P18480 tA(AGC)PtA(AGC)P 73 nt8.5□□□□□ -1.05
SNF5P18480 URA6YKL024C 615 nt8.5□□□□□ -1.05
SNF5P18480 RAS2YNL098C 969 nt8.5□□□□□ -1.05
SNF5P18480 YER188WYER188W 720 nt8.49□□□□□ -1.05
SNF5P18480 FAF1YIL019W 1041 nt8.49□□□□□ -1.05
SNF5P18480 TMA23YMR269W 636 nt8.49□□□□□ -1.05
SNF5P18480 BNS1YGR230W 414 nt8.48□□□□□ -1.05
SNF5P18480 YCR025CYCR025C 411 nt8.47□□□□□ -1.05
SNF5P18480 INA1YLR413W 2028 nt8.46□□□□□ -1.05
SNF5P18480 REC114YMR133W 1287 nt8.46□□□□□ -1.06
SNF5P18480 OYE3YPL171C 1203 nt8.46□□□□□ -1.06
SNF5P18480 SAM2YDR502C 1155 nt8.45□□□□□ -1.06
SNF5P18480 MAE1YKL029C 2010 nt8.44□□□□□ -1.06
SNF5P18480 NAS6YGR232W 687 nt8.44□□□□□ -1.06
SNF5P18480 PUS5YLR165C 765 nt8.44□□□□□ -1.06
SNF5P18480 IMO32YGR031W 1029 nt8.43□□□□□ -1.06
SNF5P18480 SPS100YHR139C 981 nt8.43□□□□□ -1.06
SNF5P18480 NAS2YIL007C 663 nt8.43□□□□□ -1.06
SNF5P18480 LYS20YDL182W 1287 nt8.42□□□□□ -1.06
SNF5P18480 ACO2YJL200C 2370 nt8.42□□□□□ -1.06
SNF5P18480 PET8YNL003C 855 nt8.41□□□□□ -1.06
SNF5P18480 DLD2YDL178W 1593 nt8.4□□□□□ -1.06
SNF5P18480 YMR007WYMR007W 381 nt8.4□□□□□ -1.06
SNF5P18480 YPL071CYPL071C 471 nt8.4□□□□□ -1.06
SNF5P18480 UTP6YDR449C 1323 nt8.39□□□□□ -1.07
SNF5P18480 RPL12BYDR418W 498 nt8.39□□□□□ -1.07
SNF5P18480 FHN1YGR131W 525 nt8.39□□□□□ -1.07
SNF5P18480 FLX1YIL134W 936 nt8.39□□□□□ -1.07
SNF5P18480 YOR343CYOR343C 327 nt8.39□□□□□ -1.07
SNF5P18480 ARP10YDR106W 855 nt8.38□□□□□ -1.07
SNF5P18480 DDI1YER143W 1287 nt8.38□□□□□ -1.07
SNF5P18480 FLR1YBR008C 1647 nt8.38□□□□□ -1.07
SNF5P18480 MET2YNL277W 1461 nt8.38□□□□□ -1.07
SNF5P18480 YFR036W-AYFR036W-A 651 nt8.37□□□□□ -1.07
SNF5P18480 MUP1YGR055W 1725 nt8.37□□□□□ -1.07
SNF5P18480 BSP1YPR171W 1731 nt8.37□□□□□ -1.07
SNF5P18480 THP3YPR045C 1413 nt8.37□□□□□ -1.07
SNF5P18480 RRT8YOL048C 1029 nt8.35□□□□□ -1.07
SNF5P18480 RCR1YBR005W 642 nt8.35□□□□□ -1.07
SNF5P18480 OSH7YHR001W 1314 nt8.34□□□□□ -1.07
SNF5P18480 SFP1YLR403W 2052 nt8.34□□□□□ -1.07
SNF5P18480 ZRT3YKL175W 1512 nt8.33□□□□□ -1.08
SNF5P18480 YPS3YLR121C 1527 nt8.33□□□□□ -1.08
SNF5P18480 MAS1YLR163C 1389 nt8.33□□□□□ -1.08
SNF5P18480 SOL2YCR073W-A 948 nt8.32□□□□□ -1.08
SNF5P18480 HEM13YDR044W 987 nt8.32□□□□□ -1.08
SNF5P18480 ATG17YLR423C 1254 nt8.32□□□□□ -1.08
SNF5P18480 FSH2YMR222C 672 nt8.32□□□□□ -1.08
SNF5P18480 SER2YGR208W 930 nt8.31□□□□□ -1.08
SNF5P18480 YAL016C-AYAL016C-A 315 nt8.31□□□□□ -1.08
SNF5P18480 RSC8YFR037C 1674 nt8.3□□□□□ -1.08
SNF5P18480 FMS1YMR020W 1527 nt8.3□□□□□ -1.08
SNF5P18480 TVP23YDR084C 600 nt8.3□□□□□ -1.08
SNF5P18480 LSM5YER146W 282 nt8.3□□□□□ -1.08
SNF5P18480 PHB2YGR231C 933 nt8.3□□□□□ -1.08
SNF5P18480 SEM1YDR363W-A 270 nt8.29□□□□□ -1.08
SNF5P18480 YOR268CYOR268C 399 nt8.29□□□□□ -1.08
SNF5P18480 HRA1HRA1 564 nt8.28□□□□□ -1.08
SNF5P18480 ADH3YMR083W 1128 nt8.28□□□□□ -1.08
SNF5P18480 HOL1YNR055C 1761 nt8.27□□□□□ -1.08
SNF5P18480 YDR455CYDR455C 309 nt8.27□□□□□ -1.09
SNF5P18480 HTS1YPR033C 1641 nt8.26□□□□□ -1.09
SNF5P18480 CYC3YAL039C 810 nt8.26□□□□□ -1.09
SNF5P18480 TAT2YOL020W 1779 nt8.25□□□□□ -1.09
SNF5P18480 HMG2YLR450W 3138 nt8.25□□□□□ -1.09
SNF5P18480 MFG1YDL233W 1377 nt8.24□□□□□ -1.09
SNF5P18480 ADE8YDR408C 645 nt8.24□□□□□ -1.09
SNF5P18480 SPE2YOL052C 1191 nt8.23□□□□□ -1.09
SNF5P18480 BET2YPR176C 978 nt8.23□□□□□ -1.09
SNF5P18480 KDX1YKL161C 1302 nt8.22□□□□□ -1.09
SNF5P18480 GRH1YDR517W 1119 nt8.21□□□□□ -1.1
SNF5P18480 YJL067WYJL067W 351 nt8.21□□□□□ -1.1
SNF5P18480 ACH1YBL015W 1581 nt8.2□□□□□ -1.1
SNF5P18480 MOB1YIL106W 945 nt8.2□□□□□ -1.1
SNF5P18480 SWP1YMR149W 861 nt8.2□□□□□ -1.1
SNF5P18480 ERG13YML126C 1476 nt8.19□□□□□ -1.1
SNF5P18480 OPI3YJR073C 621 nt8.19□□□□□ -1.1
SNF5P18480 SPP2YOR148C 558 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 66.1 ms