Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 AC011484.1-201ENST00000377652 1995 ntBASIC17.86■□□□□ 0.45
CDH20Q9HBT6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 FAM21FP-204ENST00000608637 956 ntBASIC17.86■□□□□ 0.45
CDH20Q9HBT6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH20Q9HBT6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.85■□□□□ 0.45
CDH20Q9HBT6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 AC090192.1-201ENST00000517740 490 ntBASIC17.85■□□□□ 0.45
CDH20Q9HBT6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH20Q9HBT6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 RAP2CP1-201ENST00000605103 478 ntBASIC17.84■□□□□ 0.45
CDH20Q9HBT6 AC016405.3-201ENST00000607710 860 ntBASIC17.84■□□□□ 0.45
CDH20Q9HBT6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDH20Q9HBT6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH20Q9HBT6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH20Q9HBT6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDH20Q9HBT6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.83■□□□□ 0.45
CDH20Q9HBT6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 CROCCP5-201ENST00000436658 830 ntBASIC17.83■□□□□ 0.44
CDH20Q9HBT6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 RARRES2P4-201ENST00000514074 484 ntBASIC17.83■□□□□ 0.44
CDH20Q9HBT6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 OR10C1-204ENST00000622521 1039 ntBASIC17.83■□□□□ 0.44
CDH20Q9HBT6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.83■□□□□ 0.44
CDH20Q9HBT6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.82■□□□□ 0.44
CDH20Q9HBT6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms