Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSNK1A1P48729 AC011767.1-201ENST00000617410 1153 ntBASIC18.24■□□□□ 0.51
CSNK1A1P48729 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSNK1A1P48729 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CSNK1A1P48729 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1A1P48729 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1A1P48729 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CSNK1A1P48729 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CSNK1A1P48729 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.23■□□□□ 0.51
CSNK1A1P48729 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.23■□□□□ 0.51
CSNK1A1P48729 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1A1P48729 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 AL591742.1-201ENST00000604433 565 ntBASIC18.22■□□□□ 0.51
CSNK1A1P48729 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.22■□□□□ 0.51
CSNK1A1P48729 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1A1P48729 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.21■□□□□ 0.51
CSNK1A1P48729 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 AC007322.4-201ENST00000509611 723 ntBASIC18.21■□□□□ 0.51
CSNK1A1P48729 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1A1P48729 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 AC007225.1-201ENST00000566331 1836 ntBASIC18.21■□□□□ 0.51
CSNK1A1P48729 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1A1P48729 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
CSNK1A1P48729 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 FP700111.2-201ENST00000619190 1892 ntBASIC18.2■□□□□ 0.5
CSNK1A1P48729 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.2■□□□□ 0.5
CSNK1A1P48729 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 DUX4L16-201ENST00000555130 1264 ntBASIC18.2■□□□□ 0.5
CSNK1A1P48729 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.2■□□□□ 0.5
CSNK1A1P48729 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1A1P48729 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms