Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 YEL025CYEL025C 3567 nt3.41□□□□□ -1.86
TY4A-JP47023 UTP14YML093W 2700 nt3.4□□□□□ -1.86
TY4A-JP47023 TSA2YDR453C 591 nt3.4□□□□□ -1.87
TY4A-JP47023 YGR035CYGR035C 351 nt3.4□□□□□ -1.87
TY4A-JP47023 NOP19YGR251W 591 nt3.4□□□□□ -1.87
TY4A-JP47023 RPS24BYIL069C 408 nt3.4□□□□□ -1.87
TY4A-JP47023 ICY1YMR195W 384 nt3.4□□□□□ -1.87
TY4A-JP47023 SNF12YNR023W 1701 nt3.4□□□□□ -1.87
TY4A-JP47023 RPB11YOL005C 363 nt3.4□□□□□ -1.87
TY4A-JP47023 YER076W-AYER076W-A 348 nt3.39□□□□□ -1.87
TY4A-JP47023 YJR140W-AYJR140W-A 150 nt3.39□□□□□ -1.87
TY4A-JP47023 PAU23YLR037C 375 nt3.39□□□□□ -1.87
TY4A-JP47023 YMR316C-AYMR316C-A 312 nt3.39□□□□□ -1.87
TY4A-JP47023 snR13snR13 124 nt3.39□□□□□ -1.87
TY4A-JP47023 YOR385WYOR385W 873 nt3.39□□□□□ -1.87
TY4A-JP47023 NSL1YPL233W 651 nt3.39□□□□□ -1.87
TY4A-JP47023 YPL276WYPL276W 438 nt3.39□□□□□ -1.87
TY4A-JP47023 MDM32YOR147W 1869 nt3.39□□□□□ -1.87
TY4A-JP47023 RPN1YHR027C 2982 nt3.39□□□□□ -1.87
TY4A-JP47023 SSN2YDR443C 4263 nt3.39□□□□□ -1.87
TY4A-JP47023 DIE2YGR227W 1578 nt3.38□□□□□ -1.87
TY4A-JP47023 NUP60YAR002W 1620 nt3.38□□□□□ -1.87
TY4A-JP47023 RPL22AYLR061W 366 nt3.38□□□□□ -1.87
TY4A-JP47023 GIS2YNL255C 462 nt3.38□□□□□ -1.87
TY4A-JP47023 YOR121CYOR121C 306 nt3.38□□□□□ -1.87
TY4A-JP47023 AYT1YLL063C 1425 nt3.37□□□□□ -1.87
TY4A-JP47023 PSF1YDR013W 627 nt3.37□□□□□ -1.87
TY4A-JP47023 YDR193WYDR193W 399 nt3.37□□□□□ -1.87
TY4A-JP47023 YER137W-AYER137W-A 306 nt3.37□□□□□ -1.87
TY4A-JP47023 YGR025WYGR025W 303 nt3.37□□□□□ -1.87
TY4A-JP47023 YLR434CYLR434C 384 nt3.37□□□□□ -1.87
TY4A-JP47023 RPS8AYBL072C 603 nt3.37□□□□□ -1.87
TY4A-JP47023 snR191snR191 274 nt3.37□□□□□ -1.87
TY4A-JP47023 YBR137WYBR137W 540 nt3.37□□□□□ -1.87
TY4A-JP47023 MIT1YEL007W 2001 nt3.37□□□□□ -1.87
TY4A-JP47023 SSY1YDR160W 2559 nt3.37□□□□□ -1.87
TY4A-JP47023 SNQ2YDR011W 4506 nt3.36□□□□□ -1.87
TY4A-JP47023 MSL5YLR116W 1431 nt3.36□□□□□ -1.87
TY4A-JP47023 FAR1YJL157C 2493 nt3.36□□□□□ -1.87
TY4A-JP47023 TMA19YKL056C 504 nt3.36□□□□□ -1.87
TY4A-JP47023 YPR039WYPR039W 336 nt3.36□□□□□ -1.87
TY4A-JP47023 RAX2YLR084C 3663 nt3.35□□□□□ -1.87
TY4A-JP47023 FUS1YCL027W 1539 nt3.35□□□□□ -1.87
TY4A-JP47023 MRH1YDR033W 963 nt3.35□□□□□ -1.87
TY4A-JP47023 PSK2YOL045W 3306 nt3.34□□□□□ -1.87
TY4A-JP47023 BMS1YPL217C 3552 nt3.34□□□□□ -1.87
TY4A-JP47023 MET10YFR030W 3108 nt3.34□□□□□ -1.87
TY4A-JP47023 CDC50YCR094W 1176 nt3.34□□□□□ -1.87
TY4A-JP47023 YDL068WYDL068W 330 nt3.34□□□□□ -1.87
TY4A-JP47023 YDR250CYDR250C 276 nt3.34□□□□□ -1.87
TY4A-JP47023 DYN2YDR424C 279 nt3.34□□□□□ -1.87
TY4A-JP47023 YER181CYER181C 324 nt3.34□□□□□ -1.87
TY4A-JP47023 PEP8YJL053W 1140 nt3.34□□□□□ -1.87
TY4A-JP47023 URA10YMR271C 684 nt3.34□□□□□ -1.87
TY4A-JP47023 IMP4YNL075W 873 nt3.34□□□□□ -1.87
TY4A-JP47023 RPS7BYNL096C 573 nt3.34□□□□□ -1.87
TY4A-JP47023 TRS120YDR407C 3870 nt3.34□□□□□ -1.87
TY4A-JP47023 COG3YER157W 2406 nt3.34□□□□□ -1.87
TY4A-JP47023 POM152YMR129W 4014 nt3.33□□□□□ -1.88
TY4A-JP47023 tC(GCA)BtC(GCA)B 72 nt3.33□□□□□ -1.88
TY4A-JP47023 tC(GCA)GtC(GCA)G 72 nt3.33□□□□□ -1.88
TY4A-JP47023 tC(GCA)P1tC(GCA)P1 72 nt3.33□□□□□ -1.88
TY4A-JP47023 tC(GCA)P2tC(GCA)P2 72 nt3.33□□□□□ -1.88
TY4A-JP47023 TIR2YOR010C 756 nt3.33□□□□□ -1.88
TY4A-JP47023 PEP12YOR036W 867 nt3.33□□□□□ -1.88
TY4A-JP47023 JSN1YJR091C 3276 nt3.32□□□□□ -1.88
TY4A-JP47023 CAJ1YER048C 1176 nt3.32□□□□□ -1.88
TY4A-JP47023 RPC10YHR143W-A 213 nt3.32□□□□□ -1.88
TY4A-JP47023 MRPL50YNR022C 420 nt3.32□□□□□ -1.88
TY4A-JP47023 YPR203WYPR203W 309 nt3.32□□□□□ -1.88
TY4A-JP47023 GCD10YNL062C 1437 nt3.32□□□□□ -1.88
TY4A-JP47023 SHQ1YIL104C 1524 nt3.32□□□□□ -1.88
TY4A-JP47023 SPB1YCL054W 2526 nt3.32□□□□□ -1.88
TY4A-JP47023 DUG2YBR281C 2637 nt3.32□□□□□ -1.88
TY4A-JP47023 GEA1YJR031C 4227 nt3.32□□□□□ -1.88
TY4A-JP47023 ECM5YMR176W 4236 nt3.31□□□□□ -1.88
TY4A-JP47023 MKT1YNL085W 2493 nt3.31□□□□□ -1.88
TY4A-JP47023 NTO1YPR031W 2247 nt3.31□□□□□ -1.88
TY4A-JP47023 GPI8YDR331W 1236 nt3.31□□□□□ -1.88
TY4A-JP47023 RPS17BYDR447C 411 nt3.31□□□□□ -1.88
TY4A-JP47023 YML009C-AYML009C-A 327 nt3.31□□□□□ -1.88
TY4A-JP47023 YMR193C-AYMR193C-A 387 nt3.31□□□□□ -1.88
TY4A-JP47023 ESF2YNR054C 951 nt3.31□□□□□ -1.88
TY4A-JP47023 SNX41YDR425W 1878 nt3.3□□□□□ -1.88
TY4A-JP47023 YEL018C-AYEL018C-A 534 nt3.3□□□□□ -1.88
TY4A-JP47023 YER188C-AYER188C-A 300 nt3.3□□□□□ -1.88
TY4A-JP47023 PET191YJR034W 327 nt3.3□□□□□ -1.88
TY4A-JP47023 RPS21AYKR057W 264 nt3.3□□□□□ -1.88
TY4A-JP47023 YOR192C-CYOR192C-C 237 nt3.3□□□□□ -1.88
TY4A-JP47023 SLA1YBL007C 3735 nt3.3□□□□□ -1.88
TY4A-JP47023 NDD1YOR372C 1665 nt3.3□□□□□ -1.88
TY4A-JP47023 YPR014CYPR014C 330 nt3.29□□□□□ -1.88
TY4A-JP47023 DNM1YLL001W 2274 nt3.29□□□□□ -1.88
TY4A-JP47023 SIN3YOL004W 4611 nt3.29□□□□□ -1.88
TY4A-JP47023 FIR1YER032W 2631 nt3.28□□□□□ -1.88
TY4A-JP47023 CHO2YGR157W 2610 nt3.28□□□□□ -1.88
TY4A-JP47023 TIM11YDR322C-A 291 nt3.28□□□□□ -1.88
TY4A-JP47023 YHL006W-AYHL006W-A 354 nt3.28□□□□□ -1.88
TY4A-JP47023 YKL118WYKL118W 312 nt3.28□□□□□ -1.88
TY4A-JP47023 CGI121YML036W 546 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 68.8 ms