Protein–RNA interactions for Protein: P0CX61

TY2A-F, Transposon Ty2-F Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-FP0CX61 ESF2YNR054C 951 nt2.83□□□□□ -1.96
TY2A-FP0CX61 PRM3YPL192C 402 nt2.83□□□□□ -1.96
TY2A-FP0CX61 IRC16YPR038W 360 nt2.83□□□□□ -1.96
TY2A-FP0CX61 PFK26YIL107C 2484 nt2.83□□□□□ -1.96
TY2A-FP0CX61 HEH2YDR458C 1992 nt2.83□□□□□ -1.96
TY2A-FP0CX61 ECM21YBL101C 3354 nt2.83□□□□□ -1.96
TY2A-FP0CX61 GDS1YOR355W 1569 nt2.83□□□□□ -1.96
TY2A-FP0CX61 POL2YNL262W 6669 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YDL032WYDL032W 312 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YIL169CYIL169C 2988 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YLR012CYLR012C 300 nt2.82□□□□□ -1.96
TY2A-FP0CX61 APC9YLR102C 798 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YML108WYML108W 318 nt2.82□□□□□ -1.96
TY2A-FP0CX61 PKR1YMR123W 369 nt2.82□□□□□ -1.96
TY2A-FP0CX61 RPL20AYMR242C 519 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YBL065WYBL065W 345 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YOL019W-AYOL019W-A 153 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YPR145C-AYPR145C-A 237 nt2.82□□□□□ -1.96
TY2A-FP0CX61 snR41snR41 95 nt2.82□□□□□ -1.96
TY2A-FP0CX61 CCT7YJL111W 1653 nt2.82□□□□□ -1.96
TY2A-FP0CX61 YPL216WYPL216W 3309 nt2.81□□□□□ -1.96
TY2A-FP0CX61 FLO1YAR050W 4614 nt2.81□□□□□ -1.96
TY2A-FP0CX61 ATP6Q0085 780 nt2.81□□□□□ -1.96
TY2A-FP0CX61 SMB1YER029C 591 nt2.81□□□□□ -1.96
TY2A-FP0CX61 YER189WYER189W 369 nt2.81□□□□□ -1.96
TY2A-FP0CX61 ERV1YGR029W 570 nt2.81□□□□□ -1.96
TY2A-FP0CX61 snR54snR54 86 nt2.81□□□□□ -1.96
TY2A-FP0CX61 PUF6YDR496C 1971 nt2.81□□□□□ -1.96
TY2A-FP0CX61 MSB2YGR014W 3921 nt2.81□□□□□ -1.96
TY2A-FP0CX61 NPR3YHL023C 3441 nt2.8□□□□□ -1.96
TY2A-FP0CX61 YME2YMR302C 2553 nt2.8□□□□□ -1.96
TY2A-FP0CX61 KIN82YCR091W 2163 nt2.8□□□□□ -1.96
TY2A-FP0CX61 MUD2YKL074C 1584 nt2.8□□□□□ -1.96
TY2A-FP0CX61 TLC1TLC1 1301 nt2.8□□□□□ -1.96
TY2A-FP0CX61 ADK1YDR226W 669 nt2.8□□□□□ -1.96
TY2A-FP0CX61 GPI19YDR437W 423 nt2.8□□□□□ -1.96
TY2A-FP0CX61 IRC4YDR540C 540 nt2.8□□□□□ -1.96
TY2A-FP0CX61 PHD1YKL043W 1101 nt2.8□□□□□ -1.96
TY2A-FP0CX61 CMS1YLR003C 876 nt2.8□□□□□ -1.96
TY2A-FP0CX61 RMP1YLR145W 606 nt2.8□□□□□ -1.96
TY2A-FP0CX61 RPL6AYML073C 531 nt2.8□□□□□ -1.96
TY2A-FP0CX61 LEU3YLR451W 2661 nt2.8□□□□□ -1.96
TY2A-FP0CX61 YNL034WYNL034W 1839 nt2.79□□□□□ -1.96
TY2A-FP0CX61 DPB11YJL090C 2295 nt2.79□□□□□ -1.96
TY2A-FP0CX61 AST2YER101C 1293 nt2.79□□□□□ -1.96
TY2A-FP0CX61 YPS5YGL259W 498 nt2.79□□□□□ -1.96
TY2A-FP0CX61 AIM29YKR074W 468 nt2.79□□□□□ -1.96
TY2A-FP0CX61 ROG1YGL144C 2058 nt2.79□□□□□ -1.96
TY2A-FP0CX61 PPN1YDR452W 2025 nt2.79□□□□□ -1.96
TY2A-FP0CX61 ITC1YGL133W 3795 nt2.79□□□□□ -1.96
TY2A-FP0CX61 YIL166CYIL166C 1629 nt2.79□□□□□ -1.96
TY2A-FP0CX61 PUF4YGL014W 2667 nt2.78□□□□□ -1.96
TY2A-FP0CX61 SPE1YKL184W 1401 nt2.78□□□□□ -1.96
TY2A-FP0CX61 ECM5YMR176W 4236 nt2.78□□□□□ -1.96
TY2A-FP0CX61 YAL026C-AYAL026C-A 438 nt2.78□□□□□ -1.96
TY2A-FP0CX61 YJR023CYJR023C 402 nt2.78□□□□□ -1.96
TY2A-FP0CX61 RPL37AYLR185W 267 nt2.78□□□□□ -1.96
TY2A-FP0CX61 RPB11YOL005C 363 nt2.78□□□□□ -1.96
TY2A-FP0CX61 YPL197CYPL197C 414 nt2.78□□□□□ -1.96
TY2A-FP0CX61 YKR078WYKR078W 1758 nt2.78□□□□□ -1.96
TY2A-FP0CX61 PSK2YOL045W 3306 nt2.78□□□□□ -1.97
TY2A-FP0CX61 YHR214C-CYHR214C-C 1437 nt2.77□□□□□ -1.97
TY2A-FP0CX61 BNA4YBL098W 1383 nt2.77□□□□□ -1.97
TY2A-FP0CX61 HMRA1YCR097W 381 nt2.77□□□□□ -1.97
TY2A-FP0CX61 BMH2YDR099W 822 nt2.77□□□□□ -1.97
TY2A-FP0CX61 RNR4YGR180C 1038 nt2.77□□□□□ -1.97
TY2A-FP0CX61 IGO1YNL157W 507 nt2.77□□□□□ -1.97
TY2A-FP0CX61 SWM2YNR004W 441 nt2.77□□□□□ -1.97
TY2A-FP0CX61 FYV12YOR183W 390 nt2.77□□□□□ -1.97
TY2A-FP0CX61 MDM32YOR147W 1869 nt2.77□□□□□ -1.97
TY2A-FP0CX61 GET1YGL020C 708 nt2.76□□□□□ -1.97
TY2A-FP0CX61 YIL030W-AYIL030W-A 339 nt2.76□□□□□ -1.97
TY2A-FP0CX61 TPM2YIL138C 486 nt2.76□□□□□ -1.97
TY2A-FP0CX61 YMR153C-AYMR153C-A 336 nt2.76□□□□□ -1.97
TY2A-FP0CX61 ILS1YBL076C 3219 nt2.76□□□□□ -1.97
TY2A-FP0CX61 GCD6YDR211W 2139 nt2.75□□□□□ -1.97
TY2A-FP0CX61 GPI17YDR434W 1605 nt2.75□□□□□ -1.97
TY2A-FP0CX61 MET6YER091C 2304 nt2.75□□□□□ -1.97
TY2A-FP0CX61 snR76snR76 109 nt2.75□□□□□ -1.97
TY2A-FP0CX61 tC(GCA)BtC(GCA)B 72 nt2.75□□□□□ -1.97
TY2A-FP0CX61 tC(GCA)GtC(GCA)G 72 nt2.75□□□□□ -1.97
TY2A-FP0CX61 tC(GCA)P1tC(GCA)P1 72 nt2.75□□□□□ -1.97
TY2A-FP0CX61 tC(GCA)P2tC(GCA)P2 72 nt2.75□□□□□ -1.97
TY2A-FP0CX61 BTT1YDR252W 450 nt2.75□□□□□ -1.97
TY2A-FP0CX61 RRT13YER066W 558 nt2.75□□□□□ -1.97
TY2A-FP0CX61 RPL23BYER117W 414 nt2.75□□□□□ -1.97
TY2A-FP0CX61 GLC7YER133W 939 nt2.75□□□□□ -1.97
TY2A-FP0CX61 PEP8YJL053W 1140 nt2.75□□□□□ -1.97
TY2A-FP0CX61 CAT5YOR125C 702 nt2.75□□□□□ -1.97
TY2A-FP0CX61 PMR1YGL167C 2853 nt2.75□□□□□ -1.97
TY2A-FP0CX61 DUG2YBR281C 2637 nt2.75□□□□□ -1.97
TY2A-FP0CX61 TCB2YNL087W 3537 nt2.75□□□□□ -1.97
TY2A-FP0CX61 NDD1YOR372C 1665 nt2.75□□□□□ -1.97
TY2A-FP0CX61 SPO71YDR104C 3738 nt2.75□□□□□ -1.97
TY2A-FP0CX61 TAO3YIL129C 7131 nt2.75□□□□□ -1.97
TY2A-FP0CX61 BAS1YKR099W 2436 nt2.74□□□□□ -1.97
TY2A-FP0CX61 YDR114CYDR114C 303 nt2.74□□□□□ -1.97
TY2A-FP0CX61 HPA3YEL066W 540 nt2.74□□□□□ -1.97
TY2A-FP0CX61 YER006C-AYER006C-A 318 nt2.74□□□□□ -1.97
TY2A-FP0CX61 HMF1YER057C 390 nt2.74□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms