Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 DHR2YKL078W 2208 nt5.69□□□□□ -1.5
UBP9P39967 LSM1YJL124C 519 nt5.69□□□□□ -1.5
UBP9P39967 SNC2YOR327C 348 nt5.69□□□□□ -1.5
UBP9P39967 MPH2YDL247W 1830 nt5.69□□□□□ -1.5
UBP9P39967 RRM3YHR031C 2172 nt5.69□□□□□ -1.5
UBP9P39967 KIP3YGL216W 2418 nt5.68□□□□□ -1.5
UBP9P39967 FRT2YAL028W 1587 nt5.68□□□□□ -1.5
UBP9P39967 YGR250CYGR250C 2346 nt5.68□□□□□ -1.5
UBP9P39967 RPS24AYER074W 408 nt5.68□□□□□ -1.5
UBP9P39967 TKL1YPR074C 2043 nt5.68□□□□□ -1.5
UBP9P39967 IMA1YGR287C 1770 nt5.67□□□□□ -1.5
UBP9P39967 IMA2YOL157C 1770 nt5.67□□□□□ -1.5
UBP9P39967 FOL1YNL256W 2475 nt5.67□□□□□ -1.5
UBP9P39967 PRM15YMR278W 1869 nt5.67□□□□□ -1.5
UBP9P39967 NKP2YLR315W 462 nt5.67□□□□□ -1.5
UBP9P39967 ZIP2YGL249W 2115 nt5.66□□□□□ -1.5
UBP9P39967 EMC6YLL014W 327 nt5.66□□□□□ -1.5
UBP9P39967 RPL32YBL092W 393 nt5.66□□□□□ -1.5
UBP9P39967 MGR2YPL098C 342 nt5.66□□□□□ -1.5
UBP9P39967 ISU1YPL135W 498 nt5.66□□□□□ -1.5
UBP9P39967 YDL199CYDL199C 2064 nt5.66□□□□□ -1.5
UBP9P39967 MUS81YDR386W 1899 nt5.66□□□□□ -1.5
UBP9P39967 ARN2YHL047C 1863 nt5.66□□□□□ -1.5
UBP9P39967 GPB1YOR371C 2694 nt5.65□□□□□ -1.5
UBP9P39967 YPL278CYPL278C 303 nt5.65□□□□□ -1.5
UBP9P39967 YBR109W-AYBR109W-A 225 nt5.65□□□□□ -1.5
UBP9P39967 SRB6YBR253W 366 nt5.65□□□□□ -1.5
UBP9P39967 NUP1YOR098C 3231 nt5.65□□□□□ -1.51
UBP9P39967 YAP1802YGR241C 1707 nt5.65□□□□□ -1.51
UBP9P39967 YEL1YBL060W 2064 nt5.65□□□□□ -1.51
UBP9P39967 NOT3YIL038C 2511 nt5.65□□□□□ -1.51
UBP9P39967 YJR030CYJR030C 2238 nt5.64□□□□□ -1.51
UBP9P39967 YJL132WYJL132W 2253 nt5.64□□□□□ -1.51
UBP9P39967 YVC1YOR087W 2028 nt5.64□□□□□ -1.51
UBP9P39967 snR81snR81 201 nt5.64□□□□□ -1.51
UBP9P39967 RPL11BYGR085C 525 nt5.64□□□□□ -1.51
UBP9P39967 RPL11AYPR102C 525 nt5.64□□□□□ -1.51
UBP9P39967 YER158CYER158C 1722 nt5.63□□□□□ -1.51
UBP9P39967 PGM2YMR105C 1710 nt5.63□□□□□ -1.51
UBP9P39967 YND1YER005W 1893 nt5.63□□□□□ -1.51
UBP9P39967 RPC10YHR143W-A 213 nt5.63□□□□□ -1.51
UBP9P39967 YAL044W-AYAL044W-A 333 nt5.63□□□□□ -1.51
UBP9P39967 HPF1YOL155C 2904 nt5.63□□□□□ -1.51
UBP9P39967 CPS1YJL172W 1731 nt5.62□□□□□ -1.51
UBP9P39967 POL12YBL035C 2118 nt5.62□□□□□ -1.51
UBP9P39967 DPB11YJL090C 2295 nt5.62□□□□□ -1.51
UBP9P39967 GIS2YNL255C 462 nt5.62□□□□□ -1.51
UBP9P39967 SAR1YPL218W 573 nt5.62□□□□□ -1.51
UBP9P39967 VPS1YKR001C 2115 nt5.62□□□□□ -1.51
UBP9P39967 YDR355CYDR355C 303 nt5.61□□□□□ -1.51
UBP9P39967 YER188C-AYER188C-A 300 nt5.61□□□□□ -1.51
UBP9P39967 RPS22BYLR367W 393 nt5.61□□□□□ -1.51
UBP9P39967 COX14YML129C 213 nt5.61□□□□□ -1.51
UBP9P39967 KRI1YNL308C 1776 nt5.61□□□□□ -1.51
UBP9P39967 EMW1YNL313C 2715 nt5.61□□□□□ -1.51
UBP9P39967 SEC63YOR254C 1992 nt5.61□□□□□ -1.51
UBP9P39967 MET12YPL023C 1974 nt5.61□□□□□ -1.51
UBP9P39967 YPR146CYPR146C 330 nt5.61□□□□□ -1.51
UBP9P39967 LAS21YJL062W 2493 nt5.6□□□□□ -1.51
UBP9P39967 PRP43YGL120C 2304 nt5.6□□□□□ -1.51
UBP9P39967 GCD6YDR211W 2139 nt5.6□□□□□ -1.51
UBP9P39967 ARN1YHL040C 1884 nt5.6□□□□□ -1.51
UBP9P39967 NAN1YPL126W 2691 nt5.6□□□□□ -1.51
UBP9P39967 YDL242WYDL242W 354 nt5.6□□□□□ -1.51
UBP9P39967 AGA1YNR044W 2178 nt5.6□□□□□ -1.51
UBP9P39967 MUK1YPL070W 1839 nt5.6□□□□□ -1.51
UBP9P39967 MNN2YBR015C 1794 nt5.6□□□□□ -1.51
UBP9P39967 RIM101YHL027W 1878 nt5.59□□□□□ -1.51
UBP9P39967 PDI1YCL043C 1569 nt5.59□□□□□ -1.52
UBP9P39967 PAH1YMR165C 2589 nt5.59□□□□□ -1.52
UBP9P39967 UTP8YGR128C 2142 nt5.58□□□□□ -1.52
UBP9P39967 YKR033CYKR033C 426 nt5.58□□□□□ -1.52
UBP9P39967 TFB1YDR311W 1929 nt5.58□□□□□ -1.52
UBP9P39967 RNR3YIL066C 2610 nt5.57□□□□□ -1.52
UBP9P39967 RPA12YJR063W 378 nt5.57□□□□□ -1.52
UBP9P39967 PDC1YLR044C 1692 nt5.56□□□□□ -1.52
UBP9P39967 YDR230WYDR230W 348 nt5.56□□□□□ -1.52
UBP9P39967 YJL020W-AYJL020W-A 258 nt5.56□□□□□ -1.52
UBP9P39967 ILV5YLR355C 1188 nt5.56□□□□□ -1.52
UBP9P39967 YPL182CYPL182C 384 nt5.56□□□□□ -1.52
UBP9P39967 VPS41YDR080W 2979 nt5.55□□□□□ -1.52
UBP9P39967 AIP1YMR092C 1848 nt5.55□□□□□ -1.52
UBP9P39967 RPL28YGL103W 450 nt5.55□□□□□ -1.52
UBP9P39967 HSP10YOR020C 321 nt5.55□□□□□ -1.52
UBP9P39967 LCD1YDR499W 2244 nt5.55□□□□□ -1.52
UBP9P39967 YEL077CYEL077C 3834 nt5.55□□□□□ -1.52
UBP9P39967 JHD2YJR119C 2187 nt5.55□□□□□ -1.52
UBP9P39967 HSP104YLL026W 2727 nt5.54□□□□□ -1.52
UBP9P39967 YSH1YLR277C 2340 nt5.54□□□□□ -1.52
UBP9P39967 PWP1YLR196W 1731 nt5.54□□□□□ -1.52
UBP9P39967 YGR242WYGR242W 309 nt5.54□□□□□ -1.52
UBP9P39967 PIS1YPR113W 663 nt5.54□□□□□ -1.52
UBP9P39967 DAK1YML070W 1755 nt5.54□□□□□ -1.52
UBP9P39967 FLC3YGL139W 2409 nt5.54□□□□□ -1.52
UBP9P39967 AIM9YER080W 1884 nt5.54□□□□□ -1.52
UBP9P39967 REV1YOR346W 2958 nt5.53□□□□□ -1.52
UBP9P39967 PRT1YOR361C 2292 nt5.53□□□□□ -1.52
UBP9P39967 YDL109CYDL109C 1944 nt5.53□□□□□ -1.52
UBP9P39967 RPS11AYDR025W 471 nt5.53□□□□□ -1.52
UBP9P39967 YFR012W-AYFR012W-A 87 nt5.53□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 43.8 ms