Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 YCL019WYCL019W 5313 nt3.05□□□□□ -1.92
VPS41P38959 IES5YER092W 378 nt3.05□□□□□ -1.92
VPS41P38959 tK(UUU)DtK(UUU)D 73 nt3.05□□□□□ -1.92
VPS41P38959 tK(UUU)G1tK(UUU)G1 73 nt3.05□□□□□ -1.92
VPS41P38959 tK(UUU)G2tK(UUU)G2 73 nt3.05□□□□□ -1.92
VPS41P38959 tK(UUU)KtK(UUU)K 73 nt3.05□□□□□ -1.92
VPS41P38959 tK(UUU)LtK(UUU)L 73 nt3.05□□□□□ -1.92
VPS41P38959 tK(UUU)OtK(UUU)O 73 nt3.05□□□□□ -1.92
VPS41P38959 tK(UUU)PtK(UUU)P 73 nt3.05□□□□□ -1.92
VPS41P38959 FMP32YFL046W 624 nt3.05□□□□□ -1.92
VPS41P38959 YGL015CYGL015C 393 nt3.05□□□□□ -1.92
VPS41P38959 YLR406C-AYLR406C-A 150 nt3.05□□□□□ -1.92
VPS41P38959 RPL20AYMR242C 519 nt3.05□□□□□ -1.92
VPS41P38959 RIO2YNL207W 1278 nt3.05□□□□□ -1.92
VPS41P38959 SFM1YOR021C 642 nt3.05□□□□□ -1.92
VPS41P38959 CAT5YOR125C 702 nt3.05□□□□□ -1.92
VPS41P38959 RAX2YLR084C 3663 nt3.05□□□□□ -1.92
VPS41P38959 YEL1YBL060W 2064 nt3.05□□□□□ -1.92
VPS41P38959 YDR061WYDR061W 1620 nt3.04□□□□□ -1.92
VPS41P38959 HPA3YEL066W 540 nt3.04□□□□□ -1.92
VPS41P38959 HUR1YGL168W 333 nt3.04□□□□□ -1.92
VPS41P38959 YGR073CYGR073C 372 nt3.04□□□□□ -1.92
VPS41P38959 YHL005CYHL005C 393 nt3.04□□□□□ -1.92
VPS41P38959 CMS1YLR003C 876 nt3.04□□□□□ -1.92
VPS41P38959 CWC24YLR323C 780 nt3.04□□□□□ -1.92
VPS41P38959 ARC18YLR370C 537 nt3.04□□□□□ -1.92
VPS41P38959 PRP8YHR165C 7242 nt3.04□□□□□ -1.92
VPS41P38959 BI4Q0120 1917 nt3.03□□□□□ -1.92
VPS41P38959 BPT1YLL015W 4680 nt3.03□□□□□ -1.92
VPS41P38959 BNI4YNL233W 2679 nt3.03□□□□□ -1.92
VPS41P38959 YKR078WYKR078W 1758 nt3.03□□□□□ -1.92
VPS41P38959 IRC2YDR112W 309 nt3.03□□□□□ -1.92
VPS41P38959 YDR133CYDR133C 336 nt3.03□□□□□ -1.92
VPS41P38959 GET1YGL020C 708 nt3.03□□□□□ -1.92
VPS41P38959 YHL009W-AYHL009W-A 1242 nt3.03□□□□□ -1.92
VPS41P38959 YMR013C-AYMR013C-A 150 nt3.03□□□□□ -1.92
VPS41P38959 LCL1YPL056C 306 nt3.03□□□□□ -1.92
VPS41P38959 NTC20YBR188C 423 nt3.03□□□□□ -1.92
VPS41P38959 YNL193WYNL193W 1677 nt3.03□□□□□ -1.92
VPS41P38959 HAA1YPR008W 2085 nt3.03□□□□□ -1.92
VPS41P38959 PPN1YDR452W 2025 nt3.03□□□□□ -1.92
VPS41P38959 RUD3YOR216C 1455 nt3.03□□□□□ -1.93
VPS41P38959 JSN1YJR091C 3276 nt3.02□□□□□ -1.93
VPS41P38959 CAF120YNL278W 3183 nt3.02□□□□□ -1.93
VPS41P38959 MRH1YDR033W 963 nt3.02□□□□□ -1.93
VPS41P38959 VPH2YKL119C 648 nt3.02□□□□□ -1.93
VPS41P38959 AIM29YKR074W 468 nt3.02□□□□□ -1.93
VPS41P38959 HRI1YLR301W 735 nt3.02□□□□□ -1.93
VPS41P38959 YMR304C-AYMR304C-A 351 nt3.02□□□□□ -1.93
VPS41P38959 YOR029WYOR029W 336 nt3.02□□□□□ -1.93
VPS41P38959 PIS1YPR113W 663 nt3.02□□□□□ -1.93
VPS41P38959 YPR203WYPR203W 309 nt3.02□□□□□ -1.93
VPS41P38959 NTO1YPR031W 2247 nt3.02□□□□□ -1.93
VPS41P38959 MUD2YKL074C 1584 nt3.02□□□□□ -1.93
VPS41P38959 DYN1YKR054C 12279 nt3.02□□□□□ -1.93
VPS41P38959 FRE8YLR047C 2061 nt3.02□□□□□ -1.93
VPS41P38959 CWC22YGR278W 1734 nt3.02□□□□□ -1.93
VPS41P38959 PAM1YDR251W 2493 nt3.01□□□□□ -1.93
VPS41P38959 ESL2YKR096W 3588 nt3.01□□□□□ -1.93
VPS41P38959 AHC2YCR082W 387 nt3.01□□□□□ -1.93
VPS41P38959 AST2YER101C 1293 nt3.01□□□□□ -1.93
VPS41P38959 CDC26YFR036W 375 nt3.01□□□□□ -1.93
VPS41P38959 YIL174WYIL174W 228 nt3.01□□□□□ -1.93
VPS41P38959 YJL222W-AYJL222W-A 228 nt3.01□□□□□ -1.93
VPS41P38959 MCR1YKL150W 909 nt3.01□□□□□ -1.93
VPS41P38959 ILV5YLR355C 1188 nt3.01□□□□□ -1.93
VPS41P38959 COX8YLR395C 237 nt3.01□□□□□ -1.93
VPS41P38959 YOR277CYOR277C 309 nt3.01□□□□□ -1.93
VPS41P38959 MSB2YGR014W 3921 nt3□□□□□ -1.93
VPS41P38959 SRB4YER022W 2064 nt3□□□□□ -1.93
VPS41P38959 RGR1YLR071C 3249 nt3□□□□□ -1.93
VPS41P38959 YIL169CYIL169C 2988 nt3□□□□□ -1.93
VPS41P38959 HOP1YIL072W 1818 nt3□□□□□ -1.93
VPS41P38959 GYP7YDL234C 2241 nt3□□□□□ -1.93
VPS41P38959 MRP49YKL167C 414 nt3□□□□□ -1.93
VPS41P38959 RPL6AYML073C 531 nt3□□□□□ -1.93
VPS41P38959 TIF11YMR260C 462 nt3□□□□□ -1.93
VPS41P38959 NOP15YNL110C 663 nt3□□□□□ -1.93
VPS41P38959 YBR085C-AYBR085C-A 258 nt3□□□□□ -1.93
VPS41P38959 ARR2YPR200C 393 nt3□□□□□ -1.93
VPS41P38959 SWD3YBR175W 948 nt3□□□□□ -1.93
VPS41P38959 DBF20YPR111W 1695 nt3□□□□□ -1.93
VPS41P38959 MUS81YDR386W 1899 nt3□□□□□ -1.93
VPS41P38959 ATP22YDR350C 2055 nt3□□□□□ -1.93
VPS41P38959 YKL222CYKL222C 2118 nt2.99□□□□□ -1.93
VPS41P38959 VHR2YER064C 1518 nt2.99□□□□□ -1.93
VPS41P38959 SKT5YBL061C 2091 nt2.99□□□□□ -1.93
VPS41P38959 RTR2YDR066C 591 nt2.99□□□□□ -1.93
VPS41P38959 YDR269CYDR269C 324 nt2.99□□□□□ -1.93
VPS41P38959 RTR1YER139C 681 nt2.99□□□□□ -1.93
VPS41P38959 YGR053CYGR053C 852 nt2.99□□□□□ -1.93
VPS41P38959 RTS3YGR161C 792 nt2.99□□□□□ -1.93
VPS41P38959 DFG10YIL049W 762 nt2.99□□□□□ -1.93
VPS41P38959 YML108WYML108W 318 nt2.99□□□□□ -1.93
VPS41P38959 PDR17YNL264C 1053 nt2.99□□□□□ -1.93
VPS41P38959 snR54snR54 86 nt2.99□□□□□ -1.93
VPS41P38959 SLH1YGR271W 5904 nt2.99□□□□□ -1.93
VPS41P38959 TOM1YDR457W 9807 nt2.98□□□□□ -1.93
VPS41P38959 YDL009CYDL009C 324 nt2.98□□□□□ -1.93
VPS41P38959 EMI1YDR512C 564 nt2.98□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 41.2 ms