Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 SWH1YAR042W 3567 nt3.95□□□□□ -1.78
PUF4P25339 LCB5YLR260W 2064 nt3.94□□□□□ -1.78
PUF4P25339 SRC1YML034W 2505 nt3.94□□□□□ -1.78
PUF4P25339 YMR294W-AYMR294W-A 360 nt3.94□□□□□ -1.78
PUF4P25339 YMR316C-AYMR316C-A 312 nt3.94□□□□□ -1.78
PUF4P25339 ARO80YDR421W 2853 nt3.94□□□□□ -1.78
PUF4P25339 SYT1YPR095C 3681 nt3.94□□□□□ -1.78
PUF4P25339 21S_rRNA21S_rRNA 3296 nt3.94□□□□□ -1.78
PUF4P25339 SSP1YHR184W 1716 nt3.93□□□□□ -1.78
PUF4P25339 LCB4YOR171C 1875 nt3.93□□□□□ -1.78
PUF4P25339 YCR081C-AYCR081C-A 237 nt3.93□□□□□ -1.78
PUF4P25339 YDL176WYDL176W 2127 nt3.93□□□□□ -1.78
PUF4P25339 AIM11YER093C-A 414 nt3.93□□□□□ -1.78
PUF4P25339 RPS26BYER131W 360 nt3.93□□□□□ -1.78
PUF4P25339 TSC3YBR058C-A 243 nt3.93□□□□□ -1.78
PUF4P25339 TCB3YML072C 4638 nt3.93□□□□□ -1.78
PUF4P25339 SEC15YGL233W 2733 nt3.93□□□□□ -1.78
PUF4P25339 TRS120YDR407C 3870 nt3.93□□□□□ -1.78
PUF4P25339 ARG2YJL071W 1725 nt3.92□□□□□ -1.78
PUF4P25339 SKN7YHR206W 1869 nt3.92□□□□□ -1.78
PUF4P25339 HFM1YGL251C 3564 nt3.92□□□□□ -1.78
PUF4P25339 PBS2YJL128C 2007 nt3.92□□□□□ -1.78
PUF4P25339 ELM1YKL048C 1923 nt3.92□□□□□ -1.78
PUF4P25339 YDR102CYDR102C 333 nt3.92□□□□□ -1.78
PUF4P25339 YDR250CYDR250C 276 nt3.92□□□□□ -1.78
PUF4P25339 IES6YEL044W 501 nt3.92□□□□□ -1.78
PUF4P25339 YFL032WYFL032W 321 nt3.92□□□□□ -1.78
PUF4P25339 YKL156C-AYKL156C-A 117 nt3.92□□□□□ -1.78
PUF4P25339 RPL15AYLR029C 615 nt3.92□□□□□ -1.78
PUF4P25339 OST6YML019W 999 nt3.92□□□□□ -1.78 RIP-Chip
PUF4P25339 YNL198CYNL198C 303 nt3.92□□□□□ -1.78
PUF4P25339 HSP10YOR020C 321 nt3.92□□□□□ -1.78
PUF4P25339 MES1YGR264C 2256 nt3.92□□□□□ -1.78 RIP-Chip
PUF4P25339 CBP2YHL038C 1893 nt3.92□□□□□ -1.78
PUF4P25339 YDL068WYDL068W 330 nt3.91□□□□□ -1.78
PUF4P25339 YER038W-AYER038W-A 381 nt3.91□□□□□ -1.78
PUF4P25339 YER107W-AYER107W-A 321 nt3.91□□□□□ -1.78
PUF4P25339 URA10YMR271C 684 nt3.91□□□□□ -1.78
PUF4P25339 YNL179CYNL179C 438 nt3.91□□□□□ -1.78
PUF4P25339 BAR1YIL015W 1764 nt3.91□□□□□ -1.78
PUF4P25339 JJJ2YJL162C 1752 nt3.91□□□□□ -1.78 RIP-Chip
PUF4P25339 KRI1YNL308C 1776 nt3.91□□□□□ -1.78 RIP-Chip
PUF4P25339 YLR001CYLR001C 2589 nt3.91□□□□□ -1.78
PUF4P25339 YJR003CYJR003C 1560 nt3.9□□□□□ -1.78
PUF4P25339 FRQ1YDR373W 573 nt3.9□□□□□ -1.79
PUF4P25339 YGR107WYGR107W 450 nt3.9□□□□□ -1.79
PUF4P25339 MKT1YNL085W 2493 nt3.89□□□□□ -1.79
PUF4P25339 NOG1YPL093W 1944 nt3.89□□□□□ -1.79
PUF4P25339 LRG1YDL240W 3054 nt3.89□□□□□ -1.79
PUF4P25339 tC(GCA)BtC(GCA)B 72 nt3.89□□□□□ -1.79
PUF4P25339 tC(GCA)GtC(GCA)G 72 nt3.89□□□□□ -1.79
PUF4P25339 tC(GCA)P1tC(GCA)P1 72 nt3.89□□□□□ -1.79
PUF4P25339 tC(GCA)P2tC(GCA)P2 72 nt3.89□□□□□ -1.79
PUF4P25339 YGR051CYGR051C 324 nt3.89□□□□□ -1.79
PUF4P25339 SGN1YIR001C 753 nt3.89□□□□□ -1.79
PUF4P25339 YPL080CYPL080C 327 nt3.89□□□□□ -1.79 RIP-Chip
PUF4P25339 APE2YKL157W 2859 nt3.89□□□□□ -1.79
PUF4P25339 RNR1YER070W 2667 nt3.88□□□□□ -1.79 RIP-Chip
PUF4P25339 YER091C-AYER091C-A 222 nt3.88□□□□□ -1.79
PUF4P25339 RNR4YGR180C 1038 nt3.88□□□□□ -1.79
PUF4P25339 YOR146WYOR146W 306 nt3.88□□□□□ -1.79 RIP-Chip
PUF4P25339 TIM18YOR297C 579 nt3.88□□□□□ -1.79
PUF4P25339 YPR053CYPR053C 456 nt3.88□□□□□ -1.79
PUF4P25339 CCM1YGR150C 2595 nt3.87□□□□□ -1.79
PUF4P25339 YHR007C-AYHR007C-A 216 nt3.87□□□□□ -1.79
PUF4P25339 YKL162C-AYKL162C-A 153 nt3.87□□□□□ -1.79
PUF4P25339 YLR230WYLR230W 306 nt3.87□□□□□ -1.79
PUF4P25339 YLR302CYLR302C 363 nt3.87□□□□□ -1.79
PUF4P25339 SIP18YMR175W 240 nt3.87□□□□□ -1.79
PUF4P25339 IMP4YNL075W 873 nt3.87□□□□□ -1.79
PUF4P25339 YOR385WYOR385W 873 nt3.87□□□□□ -1.79
PUF4P25339 MUS81YDR386W 1899 nt3.87□□□□□ -1.79
PUF4P25339 EMP70YLR083C 2004 nt3.87□□□□□ -1.79
PUF4P25339 STE5YDR103W 2754 nt3.86□□□□□ -1.79
PUF4P25339 JEN1YKL217W 1851 nt3.86□□□□□ -1.79
PUF4P25339 SSM4YIL030C 3960 nt3.86□□□□□ -1.79 RIP-Chip
PUF4P25339 KHA1YJL094C 2622 nt3.86□□□□□ -1.79
PUF4P25339 YGR069WYGR069W 336 nt3.86□□□□□ -1.79
PUF4P25339 HHT2YNL031C 411 nt3.86□□□□□ -1.79
PUF4P25339 YHR214W-AYHR214W-A 486 nt3.85□□□□□ -1.79
PUF4P25339 YLR031WYLR031W 561 nt3.85□□□□□ -1.79
PUF4P25339 RPL22AYLR061W 366 nt3.85□□□□□ -1.79 RIP-Chip
PUF4P25339 YAR068WYAR068W 486 nt3.85□□□□□ -1.79
PUF4P25339 PEX11YOL147C 711 nt3.85□□□□□ -1.79
PUF4P25339 PFY1YOR122C 381 nt3.85□□□□□ -1.79
PUF4P25339 SIN3YOL004W 4611 nt3.85□□□□□ -1.79
PUF4P25339 URB2YJR041C 3525 nt3.84□□□□□ -1.79
PUF4P25339 PMT6YGR199W 2280 nt3.84□□□□□ -1.79
PUF4P25339 TOP1YOL006C 2310 nt3.84□□□□□ -1.79
PUF4P25339 ARO1YDR127W 4767 nt3.84□□□□□ -1.79
PUF4P25339 ATP22YDR350C 2055 nt3.84□□□□□ -1.79
PUF4P25339 YJL197C-AYJL197C-A 282 nt3.84□□□□□ -1.79
PUF4P25339 snR13snR13 124 nt3.84□□□□□ -1.79
PUF4P25339 YPL039WYPL039W 951 nt3.84□□□□□ -1.79
PUF4P25339 NIC96YFR002W 2520 nt3.84□□□□□ -1.8
PUF4P25339 GSC2YGR032W 5688 nt3.84□□□□□ -1.8
PUF4P25339 SNT1YCR033W 3681 nt3.84□□□□□ -1.8
PUF4P25339 CDC45YLR103C 1953 nt3.83□□□□□ -1.8
PUF4P25339 GYL1YMR192W 2163 nt3.83□□□□□ -1.8
PUF4P25339 YJR030CYJR030C 2238 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 23.9 ms