Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM1O15116 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM1O15116 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM1O15116 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM1O15116 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM1O15116 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.99■□□□□ 0.79
LSM1O15116 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
LSM1O15116 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM1O15116 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM1O15116 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM1O15116 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM1O15116 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM1O15116 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.98■□□□□ 0.79
LSM1O15116 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM1O15116 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LSM1O15116 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
LSM1O15116 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LSM1O15116 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
LSM1O15116 TPRG1LP1-201ENST00000598702 760 ntBASIC19.98■□□□□ 0.79
LSM1O15116 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.98■□□□□ 0.79
LSM1O15116 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LSM1O15116 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM1O15116 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM1O15116 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM1O15116 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM1O15116 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM1O15116 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.97■□□□□ 0.79
LSM1O15116 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.97■□□□□ 0.79
LSM1O15116 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.97■□□□□ 0.79
LSM1O15116 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.97■□□□□ 0.79
LSM1O15116 SUDS3P1-201ENST00000505831 966 ntBASIC19.97■□□□□ 0.79
LSM1O15116 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LSM1O15116 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.97■□□□□ 0.79
LSM1O15116 AC007225.1-201ENST00000566331 1836 ntBASIC19.97■□□□□ 0.79
LSM1O15116 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LSM1O15116 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
LSM1O15116 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM1O15116 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.96■□□□□ 0.79
LSM1O15116 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.96■□□□□ 0.79
LSM1O15116 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.96■□□□□ 0.79
LSM1O15116 AL354811.1-201ENST00000610286 706 ntBASIC19.96■□□□□ 0.79
LSM1O15116 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.96■□□□□ 0.79
LSM1O15116 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LSM1O15116 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM1O15116 AC061975.6-201ENST00000579045 1553 ntBASIC19.95■□□□□ 0.78
LSM1O15116 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
LSM1O15116 AC027702.1-201ENST00000563810 1770 ntBASIC19.95■□□□□ 0.78
LSM1O15116 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LSM1O15116 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM1O15116 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.95■□□□□ 0.78
LSM1O15116 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.95■□□□□ 0.78
LSM1O15116 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM1O15116 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.95■□□□□ 0.78
LSM1O15116 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSM1O15116 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LSM1O15116 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM1O15116 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM1O15116 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM1O15116 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM1O15116 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
LSM1O15116 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
LSM1O15116 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM1O15116 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
LSM1O15116 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.94■□□□□ 0.78
LSM1O15116 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.94■□□□□ 0.78
LSM1O15116 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.94■□□□□ 0.78
LSM1O15116 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.94■□□□□ 0.78
LSM1O15116 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM1O15116 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSM1O15116 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSM1O15116 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LSM1O15116 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM1O15116 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM1O15116 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM1O15116 AP004607.4-201ENST00000530158 1459 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms