Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 YBR063CYBR063C 1215 nt3.52□□□□□ -1.85
SSM4P40318 STE11YLR362W 2154 nt3.52□□□□□ -1.85
SSM4P40318 ARP8YOR141C 2646 nt3.52□□□□□ -1.85
SSM4P40318 STT4YLR305C 5703 nt3.52□□□□□ -1.85
SSM4P40318 YDR061WYDR061W 1620 nt3.52□□□□□ -1.85
SSM4P40318 CWH41YGL027C 2502 nt3.52□□□□□ -1.85
SSM4P40318 GYL1YMR192W 2163 nt3.51□□□□□ -1.85
SSM4P40318 VPS3YDR495C 3036 nt3.51□□□□□ -1.85
SSM4P40318 YCR013CYCR013C 648 nt3.51□□□□□ -1.85
SSM4P40318 YDL242WYDL242W 354 nt3.51□□□□□ -1.85
SSM4P40318 YFR054CYFR054C 579 nt3.51□□□□□ -1.85
SSM4P40318 VEL1YGL258W 621 nt3.51□□□□□ -1.85
SSM4P40318 YJL147CYJL147C 1149 nt3.51□□□□□ -1.85
SSM4P40318 ERG29YMR134W 714 nt3.51□□□□□ -1.85
SSM4P40318 SCD6YPR129W 1050 nt3.51□□□□□ -1.85
SSM4P40318 BRE5YNR051C 1548 nt3.51□□□□□ -1.85
SSM4P40318 RPN3YER021W 1572 nt3.51□□□□□ -1.85
SSM4P40318 MSH2YOL090W 2895 nt3.5□□□□□ -1.85
SSM4P40318 EMI1YDR512C 564 nt3.5□□□□□ -1.85
SSM4P40318 RSM18YER050C 417 nt3.5□□□□□ -1.85
SSM4P40318 SDP1YIL113W 630 nt3.5□□□□□ -1.85
SSM4P40318 MRP8YKL142W 660 nt3.5□□□□□ -1.85
SSM4P40318 GRE2YOL151W 1029 nt3.5□□□□□ -1.85
SSM4P40318 YCL007CYCL007C 393 nt3.5□□□□□ -1.85
SSM4P40318 ADF1YCL058W-A 342 nt3.5□□□□□ -1.85
SSM4P40318 KEL2YGR238C 2649 nt3.5□□□□□ -1.85
SSM4P40318 OSW7YFR039C 1533 nt3.5□□□□□ -1.85
SSM4P40318 RCY1YJL204C 2523 nt3.5□□□□□ -1.85
SSM4P40318 BNA4YBL098W 1383 nt3.5□□□□□ -1.85
SSM4P40318 TIF4631YGR162W 2859 nt3.5□□□□□ -1.85
SSM4P40318 YCG1YDR325W 3108 nt3.49□□□□□ -1.85
SSM4P40318 UBC5YDR059C 447 nt3.49□□□□□ -1.85
SSM4P40318 SLD5YDR489W 885 nt3.49□□□□□ -1.85
SSM4P40318 TMN3YER113C 2121 nt3.49□□□□□ -1.85
SSM4P40318 YKL123WYKL123W 381 nt3.49□□□□□ -1.85
SSM4P40318 YNL089CYNL089C 477 nt3.49□□□□□ -1.85
SSM4P40318 YOR277CYOR277C 309 nt3.49□□□□□ -1.85
SSM4P40318 SCP160YJL080C 3669 nt3.49□□□□□ -1.85
SSM4P40318 ANR2YKL047W 1551 nt3.49□□□□□ -1.85
SSM4P40318 NSA1YGL111W 1392 nt3.49□□□□□ -1.85
SSM4P40318 MNT3YIL014W 1893 nt3.49□□□□□ -1.85
SSM4P40318 SLK19YOR195W 2466 nt3.48□□□□□ -1.85
SSM4P40318 HLR1YDR528W 1272 nt3.48□□□□□ -1.85
SSM4P40318 YFR009W-AYFR009W-A 258 nt3.48□□□□□ -1.85
SSM4P40318 AIM19YIL087C 474 nt3.48□□□□□ -1.85
SSM4P40318 YBR259WYBR259W 2067 nt3.48□□□□□ -1.85
SSM4P40318 YFL002W-BYFL002W-B 1317 nt3.48□□□□□ -1.85
SSM4P40318 YGR161W-AYGR161W-A 1317 nt3.48□□□□□ -1.85
SSM4P40318 YBL100W-AYBL100W-A 1317 nt3.48□□□□□ -1.85
SSM4P40318 YCL020WYCL020W 1317 nt3.48□□□□□ -1.85
SSM4P40318 CBP2YHL038C 1893 nt3.48□□□□□ -1.85
SSM4P40318 REF2YDR195W 1602 nt3.48□□□□□ -1.85
SSM4P40318 FKS3YMR306W 5358 nt3.48□□□□□ -1.85
SSM4P40318 SDS22YKL193C 1017 nt3.47□□□□□ -1.85
SSM4P40318 TVP18YMR071C 504 nt3.47□□□□□ -1.85
SSM4P40318 YNL109WYNL109W 546 nt3.47□□□□□ -1.85
SSM4P40318 ATX1YNL259C 222 nt3.47□□□□□ -1.85
SSM4P40318 SUS1YBR111W-A 291 nt3.47□□□□□ -1.85
SSM4P40318 SHG1YBR258C 429 nt3.47□□□□□ -1.85
SSM4P40318 BNI4YNL233W 2679 nt3.47□□□□□ -1.85
SSM4P40318 LST4YKL176C 2487 nt3.47□□□□□ -1.85
SSM4P40318 YER066C-AYER066C-A 501 nt3.46□□□□□ -1.85
SSM4P40318 VFA1YER128W 612 nt3.46□□□□□ -1.85
SSM4P40318 MND1YGL183C 660 nt3.46□□□□□ -1.85
SSM4P40318 YHR054CYHR054C 1065 nt3.46□□□□□ -1.85
SSM4P40318 DSE2YHR143W 978 nt3.46□□□□□ -1.85
SSM4P40318 YAP5YIR018W 738 nt3.46□□□□□ -1.85
SSM4P40318 ECI1YLR284C 843 nt3.46□□□□□ -1.85
SSM4P40318 YPL142CYPL142C 318 nt3.46□□□□□ -1.85
SSM4P40318 YPR153WYPR153W 423 nt3.46□□□□□ -1.85
SSM4P40318 MBA1YBR185C 837 nt3.46□□□□□ -1.85
SSM4P40318 URB2YJR041C 3525 nt3.46□□□□□ -1.86
SSM4P40318 NOP12YOL041C 1380 nt3.46□□□□□ -1.86
SSM4P40318 VTC3YPL019C 2508 nt3.45□□□□□ -1.86
SSM4P40318 RSM24YDR175C 960 nt3.45□□□□□ -1.86
SSM4P40318 DYN2YDR424C 279 nt3.45□□□□□ -1.86
SSM4P40318 THG1YGR024C 714 nt3.45□□□□□ -1.86
SSM4P40318 MVB12YGR206W 306 nt3.45□□□□□ -1.86
SSM4P40318 YHR050W-AYHR050W-A 171 nt3.45□□□□□ -1.86
SSM4P40318 YET1YKL065C 621 nt3.45□□□□□ -1.86
SSM4P40318 DYN3YMR299C 939 nt3.45□□□□□ -1.86
SSM4P40318 BPT1YLL015W 4680 nt3.45□□□□□ -1.86
SSM4P40318 MAK5YBR142W 2322 nt3.45□□□□□ -1.86
SSM4P40318 MDV1YJL112W 2145 nt3.45□□□□□ -1.86
SSM4P40318 PRE4YFR050C 801 nt3.44□□□□□ -1.86
SSM4P40318 YIP1YGR172C 747 nt3.44□□□□□ -1.86
SSM4P40318 SYS1YJL004C 612 nt3.44□□□□□ -1.86
SSM4P40318 ASG7YJL170C 630 nt3.44□□□□□ -1.86
SSM4P40318 YKT6YKL196C 603 nt3.44□□□□□ -1.86
SSM4P40318 SRL3YKR091W 741 nt3.44□□□□□ -1.86
SSM4P40318 YLR076CYLR076C 423 nt3.44□□□□□ -1.86
SSM4P40318 ARC18YLR370C 537 nt3.44□□□□□ -1.86
SSM4P40318 SSN8YNL025C 972 nt3.44□□□□□ -1.86
SSM4P40318 GIM3YNL153C 390 nt3.44□□□□□ -1.86
SSM4P40318 YBR209WYBR209W 318 nt3.44□□□□□ -1.86
SSM4P40318 CCT7YJL111W 1653 nt3.44□□□□□ -1.86
SSM4P40318 STI1YOR027W 1770 nt3.44□□□□□ -1.86
SSM4P40318 PFK26YIL107C 2484 nt3.44□□□□□ -1.86
SSM4P40318 SRB8YCR081W 4284 nt3.44□□□□□ -1.86
SSM4P40318 YDR262WYDR262W 819 nt3.44□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 19.1 ms