Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.43■□□□□ 0.061e-323■■■■□ 23.4
DKC1O60832 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.8□□□□□ -0.041e-323■■■■□ 23.4
DKC1O60832 MAP2K3-208ENST00000496046 2089 ntTSL 513.86□□□□□ -0.191e-323■■■■□ 23.4
DKC1O60832 MAP2K3-204ENST00000395491 2401 ntTSL 213.58□□□□□ -0.241e-323■■■■□ 23.4
DKC1O60832 TEX101-203ENST00000602198 1446 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.312e-7■■■■□ 23.4
DKC1O60832 BTF3L4-201ENST00000313334 4703 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.372e-7■■■■□ 23.4
DKC1O60832 BTF3L4-205ENST00000489308 794 ntTSL 2 BASIC12.24□□□□□ -0.452e-7■■■■□ 23.4
DKC1O60832 BTF3L4-204ENST00000484036 941 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.482e-7■■■■□ 23.4
DKC1O60832 MAP2K3-209ENST00000526076 575 ntTSL 410.7□□□□□ -0.71e-323■■■■□ 23.4
DKC1O60832 BTF3L4-207ENST00000526132 567 ntTSL 410.62□□□□□ -0.712e-7■■■■□ 23.4
DKC1O60832 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC9.27□□□□□ -0.932e-7■■■■□ 23.4
DKC1O60832 BTF3L4-208ENST00000533836 568 ntTSL 44.07□□□□□ -1.762e-7■■■■□ 23.4
DKC1O60832 RNU2-61P-201ENST00000411069 191 ntBASIC1.13□□□□□ -2.232e-7■■■■□ 23.4
DKC1O60832 UBAP2-209ENST00000474372 1339 ntTSL 515.66■□□□□ 0.11e-323■■■■□ 23.3
DKC1O60832 UBAP2-211ENST00000488443 492 ntTSL 514.83□□□□□ -0.041e-323■■■■□ 23.3
DKC1O60832 UBAP2-205ENST00000379239 2513 ntTSL 2 BASIC11.12□□□□□ -0.631e-323■■■■□ 23.3
DKC1O60832 SNORD121B-201ENST00000458838 81 ntBASIC3.67□□□□□ -1.821e-323■■■■□ 23.3
DKC1O60832 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.466e-6■■■■□ 23.3
DKC1O60832 DPH7-210ENST00000479650 1797 ntTSL 520.72■□□□□ 0.916e-6■■■■□ 23.3
DKC1O60832 DPH7-207ENST00000475100 919 ntTSL 318.43■□□□□ 0.546e-6■■■■□ 23.3
DKC1O60832 DPH7-212ENST00000485189 797 ntTSL 317.14■□□□□ 0.336e-6■■■■□ 23.3
DKC1O60832 DPH7-206ENST00000472113 1414 ntTSL 517.13■□□□□ 0.336e-6■■■■□ 23.3
DKC1O60832 DPH7-209ENST00000477690 1220 ntTSL 315.99■□□□□ 0.156e-6■■■■□ 23.3
DKC1O60832 DPH7-204ENST00000467768 750 ntTSL 515.46■□□□□ 0.076e-6■■■■□ 23.3
DKC1O60832 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)14.42□□□□□ -0.11e-6■■■■□ 23.3
DKC1O60832 SNHG1-221ENST00000544983 870 ntTSL 213.24□□□□□ -0.293e-6■■■■□ 23.3
DKC1O60832 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.19■□□□□ 0.821e-6■■■■□ 23.3
DKC1O60832 LINC00910-205ENST00000592094 1042 ntTSL 1 (best)19.85■□□□□ 0.771e-6■■■■□ 23.3
DKC1O60832 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.4■□□□□ 0.061e-6■■■■□ 23.3
DKC1O60832 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC14.67□□□□□ -0.061e-6■■■■□ 23.3
DKC1O60832 LINC00910-204ENST00000588654 541 ntTSL 413.59□□□□□ -0.231e-6■■■■□ 23.3
DKC1O60832 LINC00910-202ENST00000586231 2890 ntTSL 2 BASIC12.4□□□□□ -0.421e-6■■■■□ 23.3
DKC1O60832 RNU2-4P-201ENST00000606190 192 ntBASIC0.02□□□□□ -2.411e-6■■■■□ 23.3
DKC1O60832 ASAP1-205ENST00000519483 1449 ntTSL 59.88□□□□□ -0.836e-13■■■■□ 23.3
DKC1O60832 ASAP1-206ENST00000520189 572 ntTSL 49.41□□□□□ -0.96e-13■■■■□ 23.3
DKC1O60832 ASAP1-214ENST00000524124 5478 ntAPPRIS ALT2 TSL 1 (best)7.68□□□□□ -1.186e-13■■■■□ 23.3
DKC1O60832 HLF-207ENST00000573422 493 ntTSL 412.81□□□□□ -0.362e-8■■■■□ 23.3
DKC1O60832 HLF-206ENST00000573020 414 ntTSL 49.07□□□□□ -0.962e-8■■■■□ 23.3
DKC1O60832 HLF-211ENST00000575868 558 ntTSL 45.11□□□□□ -1.592e-8■■■■□ 23.3
DKC1O60832 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.224e-7■■■■□ 23.2
DKC1O60832 MICAL3-213ENST00000577821 807 ntTSL 316.02■□□□□ 0.164e-7■■■■□ 23.2
DKC1O60832 MICAL3-216ENST00000579997 519 ntTSL 514.15□□□□□ -0.144e-7■■■■□ 23.2
DKC1O60832 AC016026.1-201ENST00000476405 4328 ntTSL 2 BASIC11.74□□□□□ -0.534e-7■■■■□ 23.2
DKC1O60832 MICAL3-217ENST00000580469 3622 ntTSL 411.71□□□□□ -0.534e-7■■■■□ 23.2
DKC1O60832 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.33e-55■■■■□ 23.2
DKC1O60832 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.293e-55■■■■□ 23.2
DKC1O60832 CERS4-203ENST00000558268 713 ntTSL 328.39■■■□□ 2.143e-7■■■■□ 23.2
DKC1O60832 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.51■■□□□ 1.513e-7■■■■□ 23.2
DKC1O60832 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.54■■□□□ 1.363e-7■■■■□ 23.2
DKC1O60832 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.313e-7■■■■□ 23.2
DKC1O60832 CERS4-213ENST00000561053 768 ntTSL 521.98■■□□□ 1.113e-7■■■■□ 23.2
DKC1O60832 CERS4-214ENST00000595722 1826 ntTSL 1 (best)21.88■■□□□ 1.093e-7■■■■□ 23.2
DKC1O60832 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 13e-7■■■■□ 23.2
DKC1O60832 CERS4-206ENST00000558501 873 ntTSL 519.8■□□□□ 0.763e-7■■■■□ 23.2
DKC1O60832 CERS4-211ENST00000560412 568 ntTSL 419.26■□□□□ 0.673e-7■■■■□ 23.2
DKC1O60832 CERS4-212ENST00000561008 531 ntTSL 417.19■□□□□ 0.343e-7■■■■□ 23.2
DKC1O60832 CERS4-207ENST00000558877 758 ntTSL 314.97□□□□□ -0.013e-7■■■■□ 23.2
DKC1O60832 ARAP1-208ENST00000452383 994 ntTSL 316.65■□□□□ 0.261e-6■■■■□ 23.2
DKC1O60832 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.211e-6■■■■□ 23.2
DKC1O60832 ARAP1-210ENST00000465814 5612 ntTSL 216.31■□□□□ 0.21e-6■■■■□ 23.2
DKC1O60832 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.071e-6■■■■□ 23.2
DKC1O60832 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.031e-6■■■■□ 23.2
DKC1O60832 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.021e-6■■■■□ 23.2
DKC1O60832 ARAP1-206ENST00000427971 1101 ntTSL 514.62□□□□□ -0.071e-6■■■■□ 23.2
DKC1O60832 ARAP1-205ENST00000426523 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.441e-6■■■■□ 23.2
DKC1O60832 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.671e-6■■■■□ 23.2
DKC1O60832 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.66□□□□□ -0.061e-323■■■■□ 23.1
DKC1O60832 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.899e-12■■■■□ 23.1
DKC1O60832 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.549e-12■■■■□ 23.1
DKC1O60832 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.429e-12■■■■□ 23.1
DKC1O60832 PEMT-208ENST00000472446 473 ntTSL 326.09■■□□□ 1.772e-6■■■■□ 23.1
DKC1O60832 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.93■■□□□ 1.742e-6■■■■□ 23.1
DKC1O60832 PEMT-207ENST00000461404 591 ntTSL 525.8■■□□□ 1.722e-6■■■■□ 23.1
DKC1O60832 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.57■■□□□ 1.682e-6■■■■□ 23.1
DKC1O60832 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.43■■□□□ 1.662e-6■■■■□ 23.1
DKC1O60832 PEMT-212ENST00000580147 708 ntTSL 325.36■■□□□ 1.652e-6■■■■□ 23.1
DKC1O60832 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.355e-6■■■■□ 23.1
DKC1O60832 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.75■■□□□ 1.072e-17■■■■□ 23.1
DKC1O60832 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.39■□□□□ 0.852e-17■■■■□ 23.1
DKC1O60832 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.712e-17■■■■□ 23.1
DKC1O60832 ITGB2-215ENST00000518033 572 ntTSL 419.31■□□□□ 0.682e-6■■■■□ 23.1
DKC1O60832 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.16■□□□□ 0.662e-17■■■■□ 23.1
DKC1O60832 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.6■□□□□ 0.572e-17■■■■□ 23.1
DKC1O60832 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.59■□□□□ 0.572e-6■■■■□ 23.1
DKC1O60832 ITGB2-218ENST00000521995 556 ntTSL 417.84■□□□□ 0.452e-6■■■■□ 23.1
DKC1O60832 ITGB2-223ENST00000523663 680 ntTSL 517.62■□□□□ 0.412e-6■■■■□ 23.1
DKC1O60832 ITGB2-214ENST00000517819 527 ntTSL 217.43■□□□□ 0.382e-6■■■■□ 23.1
DKC1O60832 ITGB2-224ENST00000524251 568 ntTSL 417.2■□□□□ 0.342e-6■■■■□ 23.1
DKC1O60832 ITGB2-219ENST00000522688 606 ntTSL 416.74■□□□□ 0.272e-6■■■■□ 23.1
DKC1O60832 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.73■□□□□ 0.272e-6■■■■□ 23.1
DKC1O60832 ITGB2-222ENST00000523323 2823 ntTSL 216.39■□□□□ 0.212e-6■■■■□ 23.1
DKC1O60832 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.172e-17■■■■□ 23.1
DKC1O60832 ITGB2-216ENST00000520389 568 ntTSL 515.67■□□□□ 0.12e-6■■■■□ 23.1
DKC1O60832 ITGB2-213ENST00000517563 571 ntTSL 415.67■□□□□ 0.12e-6■■■■□ 23.1
DKC1O60832 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.092e-17■■■■□ 23.1
DKC1O60832 PEMT-205ENST00000421096 662 ntTSL 315.53■□□□□ 0.082e-6■■■■□ 23.1
DKC1O60832 SUGP2-211ENST00000598240 3235 ntTSL 215.48■□□□□ 0.072e-17■■■■□ 23.1
DKC1O60832 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.072e-17■■■■□ 23.1
DKC1O60832 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.032e-6■■■■□ 23.1
DKC1O60832 ITGB2-212ENST00000498666 4781 ntTSL 1 (best)15.17■□□□□ 0.022e-6■■■■□ 23.1
Retrieved 100 of 8,567 protein–RNA pairs in 269.7 ms