Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.871e-5■■■■□ 25.7
DKC1O60832 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.871e-5■■■■□ 25.7
DKC1O60832 EIF4A2-214ENST00000466362 545 ntTSL 23.3□□□□□ -1.881e-5■■■■□ 25.7
DKC1O60832 SNORA63.5-201ENST00000363548 123 ntBASIC-0.1□□□□□ -2.431e-5■■■■□ 25.7
DKC1O60832 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.322e-10■■■■□ 25.7
DKC1O60832 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.332e-10■■■■□ 25.7
DKC1O60832 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.422e-10■■■■□ 25.7
DKC1O60832 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.452e-10■■■■□ 25.7
DKC1O60832 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC8.52□□□□□ -1.041e-323■■■■□ 25.7
DKC1O60832 CCAR1-207ENST00000536012 2447 ntTSL 1 (best)7.68□□□□□ -1.181e-323■■■■□ 25.7
DKC1O60832 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.271e-323■■■■□ 25.7
DKC1O60832 CCAR1-214ENST00000543225 2407 ntTSL 1 (best)7.07□□□□□ -1.281e-323■■■■□ 25.7
DKC1O60832 CCAR1-213ENST00000541012 2432 ntTSL 1 (best)7□□□□□ -1.291e-323■■■■□ 25.7
DKC1O60832 CCAR1-205ENST00000483264 487 ntTSL 56.59□□□□□ -1.351e-323■■■■□ 25.7
DKC1O60832 CCAR1-215ENST00000543229 2475 ntTSL 26.55□□□□□ -1.361e-323■■■■□ 25.7
DKC1O60832 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.04□□□□□ -1.441e-323■■■■□ 25.7
DKC1O60832 CCAR1-211ENST00000539539 3224 ntTSL 24.78□□□□□ -1.641e-323■■■■□ 25.7
DKC1O60832 CCAR1-212ENST00000540210 3415 ntTSL 1 (best)4.41□□□□□ -1.71e-323■■■■□ 25.7
DKC1O60832 SNORD98-201ENST00000636377 67 ntBASIC2.33□□□□□ -2.041e-323■■■■□ 25.7
DKC1O60832 DPP9-223ENST00000601720 798 ntTSL 321.84■■□□□ 1.094e-7■■■■□ 25.7
DKC1O60832 DPP9-204ENST00000595327 423 ntTSL 315.44■□□□□ 0.064e-7■■■■□ 25.7
DKC1O60832 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.6□□□□□ -0.234e-7■■■■□ 25.7
DKC1O60832 DPP9-207ENST00000597145 4257 ntTSL 213.41□□□□□ -0.264e-7■■■■□ 25.7
DKC1O60832 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.384e-7■■■■□ 25.7
DKC1O60832 DPP9-203ENST00000594671 3851 ntTSL 5 BASIC10.78□□□□□ -0.684e-7■■■■□ 25.7
DKC1O60832 RPL23A-205ENST00000472628 639 ntTSL 1 (best) BASIC12.36□□□□□ -0.432e-18■■■■□ 25.6
DKC1O60832 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.8■□□□□ 0.282e-18■■■■□ 25.5
DKC1O60832 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.172e-18■■■■□ 25.5
DKC1O60832 RPL23A-202ENST00000394935 580 ntTSL 311.06□□□□□ -0.642e-18■■■■□ 25.5
DKC1O60832 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC8.76□□□□□ -1.012e-18■■■■□ 25.5
DKC1O60832 RPL23A-201ENST00000355731 587 ntTSL 57.01□□□□□ -1.292e-18■■■■□ 25.5
DKC1O60832 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.01□□□□□ -0.011e-6■■■■□ 25.5
DKC1O60832 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.091e-6■■■■□ 25.5
DKC1O60832 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.38□□□□□ -0.111e-6■■■■□ 25.5
DKC1O60832 EXOC3L4-203ENST00000559661 665 ntTSL 520.11■□□□□ 0.814e-12■■■■□ 25.4
DKC1O60832 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC13.1□□□□□ -0.311e-24■■■■□ 25.3
DKC1O60832 SPATS2-212ENST00000549298 643 ntTSL 326.81■■□□□ 1.883e-7■■■■□ 25.3
DKC1O60832 SPATS2-218ENST00000551540 720 ntTSL 525.64■■□□□ 1.73e-7■■■■□ 25.3
DKC1O60832 SPATS2-211ENST00000549179 570 ntTSL 425.64■■□□□ 1.73e-7■■■■□ 25.3
DKC1O60832 SPATS2-209ENST00000548777 505 ntTSL 324.67■■□□□ 1.543e-7■■■■□ 25.3
DKC1O60832 SPATS2-214ENST00000549412 2781 ntTSL 223.19■■□□□ 1.33e-7■■■■□ 25.3
DKC1O60832 SPATS2-219ENST00000552171 465 ntTSL 519.34■□□□□ 0.693e-7■■■■□ 25.3
DKC1O60832 SPATS2-205ENST00000548388 564 ntTSL 219.34■□□□□ 0.693e-7■■■■□ 25.3
DKC1O60832 SPATS2-216ENST00000550643 527 ntTSL 416.76■□□□□ 0.273e-7■■■■□ 25.3
DKC1O60832 SPATS2-217ENST00000550997 675 ntTSL 516.68■□□□□ 0.263e-7■■■■□ 25.3
DKC1O60832 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.96■□□□□ 0.153e-7■■■■□ 25.3
DKC1O60832 SPATS2-213ENST00000549375 1061 ntTSL 214.52□□□□□ -0.093e-7■■■■□ 25.3
DKC1O60832 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.13e-7■■■■□ 25.3
DKC1O60832 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.23e-7■■■■□ 25.3
DKC1O60832 SPATS2-207ENST00000548710 558 ntTSL 413.72□□□□□ -0.213e-7■■■■□ 25.3
DKC1O60832 SPATS2-204ENST00000548377 552 ntTSL 47.99□□□□□ -1.133e-7■■■■□ 25.3
DKC1O60832 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.163e-7■■■■□ 25.3
DKC1O60832 SPATS2-206ENST00000548654 546 ntTSL 32.57□□□□□ -23e-7■■■■□ 25.3
DKC1O60832 SPATS2-215ENST00000549538 570 ntTSL 41.88□□□□□ -2.113e-7■■■■□ 25.3
DKC1O60832 KDM6A-207ENST00000475233 612 ntTSL 519.97■□□□□ 0.798e-7■■■■□ 25.2
DKC1O60832 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.93■□□□□ 0.628e-7■■■■□ 25.2
DKC1O60832 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.49■□□□□ 0.558e-7■■■■□ 25.2
DKC1O60832 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.21■□□□□ 0.518e-7■■■■□ 25.2
DKC1O60832 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.05■□□□□ 0.488e-7■■■■□ 25.2
DKC1O60832 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.188e-7■■■■□ 25.2
DKC1O60832 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC13.11□□□□□ -0.318e-7■■■■□ 25.2
DKC1O60832 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.622e-8■■■■□ 25.2
DKC1O60832 GPC3-203ENST00000406757 836 ntTSL 29.27□□□□□ -0.938e-13■■■■□ 25.2
DKC1O60832 SNORA21B-201ENST00000516890 136 ntBASIC12.1□□□□□ -0.477e-70■■■■□ 25.2
DKC1O60832 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.221e-323■■■■□ 25.1
DKC1O60832 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC9.6□□□□□ -0.871e-323■■■■□ 25.1
DKC1O60832 HAUS6-203ENST00000415524 680 ntTSL 22.21□□□□□ -2.061e-323■■■■□ 25.1
DKC1O60832 SCARNA8-201ENST00000515924 131 ntBASIC0.8□□□□□ -2.281e-323■■■■□ 25.1
DKC1O60832 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.415e-7■■■■□ 25.1
DKC1O60832 NDRG1-213ENST00000519580 550 ntTSL 514.44□□□□□ -0.11e-8■■■■□ 25.1
DKC1O60832 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.422e-31■■■■□ 25.1
DKC1O60832 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.99□□□□□ -1.452e-31■■■■□ 25.1
DKC1O60832 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.89□□□□□ -1.472e-31■■■■□ 25.1
DKC1O60832 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.55□□□□□ -1.842e-31■■■■□ 25.1
DKC1O60832 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.14■■□□□ 1.456e-29■■■■□ 25
DKC1O60832 ASL-202ENST00000362000 928 ntTSL 223.17■■□□□ 1.36e-29■■■■□ 25
DKC1O60832 TINAGL1-207ENST00000478398 765 ntTSL 322.34■■□□□ 1.171e-14■■■■□ 25
DKC1O60832 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.141e-14■■■■□ 25
DKC1O60832 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.981e-14■■■■□ 25
DKC1O60832 TINAGL1-203ENST00000461030 820 ntTSL 520.93■□□□□ 0.941e-14■■■■□ 25
DKC1O60832 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.891e-14■■■■□ 25
DKC1O60832 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.56■□□□□ 0.886e-29■■■■□ 25
DKC1O60832 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.776e-29■■■■□ 25
DKC1O60832 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.486e-29■■■■□ 25
DKC1O60832 TINAGL1-209ENST00000481165 4759 ntTSL 217.55■□□□□ 0.41e-14■■■■□ 25
DKC1O60832 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.23e-6■■■■□ 25
DKC1O60832 ZNF691-202ENST00000372503 993 ntTSL 216.09■□□□□ 0.173e-6■■■■□ 25
DKC1O60832 ZNF691-207ENST00000397034 728 ntTSL 316.09■□□□□ 0.173e-6■■■■□ 25
DKC1O60832 LINC01226-204ENST00000639839 554 ntTSL 415.52■□□□□ 0.081e-14■■■■□ 25
DKC1O60832 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.013e-6■■■■□ 25
DKC1O60832 TINAGL1-206ENST00000468635 827 ntTSL 513.66□□□□□ -0.221e-14■■■■□ 25
DKC1O60832 LINC01226-207ENST00000640226 551 ntTSL 413.3□□□□□ -0.281e-14■■■■□ 25
DKC1O60832 ZNF691-203ENST00000372504 1935 ntTSL 5 BASIC12.2□□□□□ -0.463e-6■■■■□ 25
DKC1O60832 ZNF691-204ENST00000372506 1859 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.463e-6■■■■□ 25
DKC1O60832 ZNF691-205ENST00000372507 1683 ntAPPRIS P3 TSL 3 BASIC11.69□□□□□ -0.543e-6■■■■□ 25
DKC1O60832 SNHG7-202ENST00000416970 789 ntTSL 1 (best)26.74■■□□□ 1.871e-323■■■■□ 25
DKC1O60832 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.44■■□□□ 1.821e-323■■■■□ 25
DKC1O60832 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.72■■□□□ 1.391e-323■■■■□ 25
DKC1O60832 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.82e-6■■■■□ 24.9
DKC1O60832 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.152e-6■■■■□ 24.9
Retrieved 100 of 8,567 protein–RNA pairs in 138.7 ms