Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DUX1O43812 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.15■□□□□ 0.82
DUX1O43812 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DUX1O43812 BX276092.2-201ENST00000417668 665 ntBASIC20.15■□□□□ 0.82
DUX1O43812 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DUX1O43812 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.15■□□□□ 0.82
DUX1O43812 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.15■□□□□ 0.82
DUX1O43812 AC242852.2-201ENST00000615738 1807 ntBASIC20.15■□□□□ 0.82
DUX1O43812 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.15■□□□□ 0.82
DUX1O43812 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DUX1O43812 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DUX1O43812 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.14■□□□□ 0.81
DUX1O43812 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DUX1O43812 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.14■□□□□ 0.81
DUX1O43812 C11orf96-202ENST00000528572 1834 ntBASIC20.14■□□□□ 0.81
DUX1O43812 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.14■□□□□ 0.81
DUX1O43812 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DUX1O43812 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.14■□□□□ 0.81
DUX1O43812 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DUX1O43812 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
DUX1O43812 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DUX1O43812 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.14■□□□□ 0.81
DUX1O43812 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.14■□□□□ 0.81
DUX1O43812 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.14■□□□□ 0.81
DUX1O43812 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.14■□□□□ 0.81
DUX1O43812 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DUX1O43812 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.14■□□□□ 0.81
DUX1O43812 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
DUX1O43812 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DUX1O43812 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUX1O43812 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DUX1O43812 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.13■□□□□ 0.81
DUX1O43812 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUX1O43812 AC010980.2-201ENST00000587099 1412 ntBASIC20.13■□□□□ 0.81
DUX1O43812 CDV3P1-201ENST00000471403 739 ntBASIC20.13■□□□□ 0.81
DUX1O43812 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.13■□□□□ 0.81
DUX1O43812 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.13■□□□□ 0.81
DUX1O43812 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUX1O43812 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.13■□□□□ 0.81
DUX1O43812 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.13■□□□□ 0.81
DUX1O43812 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DUX1O43812 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DUX1O43812 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DUX1O43812 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.12■□□□□ 0.81
DUX1O43812 AC068473.5-201ENST00000616428 2072 ntBASIC20.12■□□□□ 0.81
DUX1O43812 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.12■□□□□ 0.81
DUX1O43812 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.12■□□□□ 0.81
DUX1O43812 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.12■□□□□ 0.81
DUX1O43812 MIR4651-201ENST00000582622 73 ntBASIC20.12■□□□□ 0.81
DUX1O43812 AC066615.1-201ENST00000640911 628 ntBASIC20.12■□□□□ 0.81
DUX1O43812 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.12■□□□□ 0.81
DUX1O43812 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DUX1O43812 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DUX1O43812 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.11■□□□□ 0.81
DUX1O43812 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.11■□□□□ 0.81
DUX1O43812 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.11■□□□□ 0.81
DUX1O43812 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
DUX1O43812 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.11■□□□□ 0.81
DUX1O43812 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.11■□□□□ 0.81
DUX1O43812 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.11■□□□□ 0.81
DUX1O43812 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.11■□□□□ 0.81
DUX1O43812 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
DUX1O43812 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
DUX1O43812 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.11■□□□□ 0.81
DUX1O43812 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DUX1O43812 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DUX1O43812 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
DUX1O43812 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DUX1O43812 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.1■□□□□ 0.81
DUX1O43812 AC091799.1-201ENST00000422823 811 ntBASIC20.1■□□□□ 0.81
DUX1O43812 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.1■□□□□ 0.81
DUX1O43812 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.1■□□□□ 0.81
DUX1O43812 FAM21FP-204ENST00000608637 956 ntBASIC20.1■□□□□ 0.81
DUX1O43812 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.1■□□□□ 0.81
DUX1O43812 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DUX1O43812 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.1■□□□□ 0.81
DUX1O43812 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms