Protein–RNA interactions for Protein: V9GX34

Csmd2, CUB and Sushi multiple domains 2, mousemouse

Predictions only

Length 3,611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd2V9GX34 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Csmd2V9GX34 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Csmd2V9GX34 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.52■■□□□ 1.03
Csmd2V9GX34 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Csmd2V9GX34 Nkain2-201ENSMUST00000092602 558 ntBASIC21.5■■□□□ 1.03
Csmd2V9GX34 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Csmd2V9GX34 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Csmd2V9GX34 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Csmd2V9GX34 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Csmd2V9GX34 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.48■■□□□ 1.03
Csmd2V9GX34 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
Csmd2V9GX34 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Csmd2V9GX34 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Csmd2V9GX34 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.44■■□□□ 1.02
Csmd2V9GX34 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Csmd2V9GX34 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Csmd2V9GX34 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Csmd2V9GX34 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Csmd2V9GX34 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Csmd2V9GX34 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Csmd2V9GX34 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Csmd2V9GX34 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Csmd2V9GX34 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Csmd2V9GX34 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Csmd2V9GX34 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Csmd2V9GX34 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.4■■□□□ 1.02
Csmd2V9GX34 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
Csmd2V9GX34 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Csmd2V9GX34 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Csmd2V9GX34 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Csmd2V9GX34 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Csmd2V9GX34 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Csmd2V9GX34 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Csmd2V9GX34 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.38■■□□□ 1.01
Csmd2V9GX34 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.38■■□□□ 1.01
Csmd2V9GX34 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Csmd2V9GX34 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Csmd2V9GX34 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Csmd2V9GX34 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Csmd2V9GX34 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Csmd2V9GX34 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Csmd2V9GX34 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.31■■□□□ 1
Csmd2V9GX34 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.3■■□□□ 1
Csmd2V9GX34 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.3■■□□□ 1
Csmd2V9GX34 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Csmd2V9GX34 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.29■■□□□ 1
Csmd2V9GX34 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.29■■□□□ 1
Csmd2V9GX34 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Csmd2V9GX34 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.28■■□□□ 1
Csmd2V9GX34 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Csmd2V9GX34 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.27■■□□□ 1
Csmd2V9GX34 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Csmd2V9GX34 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Csmd2V9GX34 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Csmd2V9GX34 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Csmd2V9GX34 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Csmd2V9GX34 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Csmd2V9GX34 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Csmd2V9GX34 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Csmd2V9GX34 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Csmd2V9GX34 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Csmd2V9GX34 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.25■□□□□ 0.99
Csmd2V9GX34 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csmd2V9GX34 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csmd2V9GX34 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Csmd2V9GX34 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
Csmd2V9GX34 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Csmd2V9GX34 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Csmd2V9GX34 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.19■□□□□ 0.98
Csmd2V9GX34 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Csmd2V9GX34 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Csmd2V9GX34 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.18■□□□□ 0.98
Csmd2V9GX34 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.18■□□□□ 0.98
Csmd2V9GX34 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Csmd2V9GX34 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Csmd2V9GX34 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Csmd2V9GX34 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Csmd2V9GX34 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Csmd2V9GX34 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Csmd2V9GX34 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Csmd2V9GX34 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.15■□□□□ 0.98
Csmd2V9GX34 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Csmd2V9GX34 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.14■□□□□ 0.98
Csmd2V9GX34 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.14■□□□□ 0.98
Csmd2V9GX34 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Csmd2V9GX34 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Csmd2V9GX34 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Csmd2V9GX34 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Csmd2V9GX34 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Csmd2V9GX34 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Csmd2V9GX34 Gm15039-201ENSMUST00000118914 875 ntBASIC21.12■□□□□ 0.97
Csmd2V9GX34 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.11■□□□□ 0.97
Csmd2V9GX34 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Csmd2V9GX34 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Csmd2V9GX34 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Csmd2V9GX34 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.1■□□□□ 0.97
Csmd2V9GX34 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.08■□□□□ 0.97
Csmd2V9GX34 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Csmd2V9GX34 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Csmd2V9GX34 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms