Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Gm3839S4R1W1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm3839S4R1W1 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3839S4R1W1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3839S4R1W1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm3839S4R1W1 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Gm3839S4R1W1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Gm3839S4R1W1 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3839S4R1W1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Gm3839S4R1W1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.08■■□□□ 1.13
Gm3839S4R1W1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Gm3839S4R1W1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3839S4R1W1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3839S4R1W1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm3839S4R1W1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.05■■□□□ 1.12
Gm3839S4R1W1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm3839S4R1W1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.04■■□□□ 1.12
Gm3839S4R1W1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Gm3839S4R1W1 Gm24970-201ENSMUST00000175582 82 ntBASIC22.03■■□□□ 1.12
Gm3839S4R1W1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3839S4R1W1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.02■■□□□ 1.12
Gm3839S4R1W1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm3839S4R1W1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Gm3839S4R1W1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3839S4R1W1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm3839S4R1W1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3839S4R1W1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Gm3839S4R1W1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Gm3839S4R1W1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm3839S4R1W1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Gm3839S4R1W1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Gm3839S4R1W1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Gm3839S4R1W1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Gm3839S4R1W1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Gm3839S4R1W1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.96■■□□□ 1.11
Gm3839S4R1W1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Gm3839S4R1W1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
Gm3839S4R1W1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3839S4R1W1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Gm3839S4R1W1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3839S4R1W1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Gm3839S4R1W1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Gm3839S4R1W1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Gm3839S4R1W1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Gm3839S4R1W1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Gm3839S4R1W1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Gm3839S4R1W1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.9■■□□□ 1.1
Gm3839S4R1W1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
Gm3839S4R1W1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3839S4R1W1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.88■■□□□ 1.09
Gm3839S4R1W1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Gm3839S4R1W1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
Gm3839S4R1W1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Gm3839S4R1W1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.85■■□□□ 1.09
Gm3839S4R1W1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3839S4R1W1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3839S4R1W1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Gm3839S4R1W1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.83■■□□□ 1.09
Gm3839S4R1W1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3839S4R1W1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Gm3839S4R1W1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Gm3839S4R1W1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Gm3839S4R1W1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.81■■□□□ 1.08
Gm3839S4R1W1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3839S4R1W1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3839S4R1W1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Gm3839S4R1W1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.79■■□□□ 1.08
Gm3839S4R1W1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3839S4R1W1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Gm3839S4R1W1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.78■■□□□ 1.08
Gm3839S4R1W1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Gm3839S4R1W1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Gm3839S4R1W1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms