Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm11599-201ENSMUST00000118720 878 ntBASIC26.38■■□□□ 1.81
Nkx2-4Q9EQM3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
Nkx2-4Q9EQM3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.36■■□□□ 1.81
Nkx2-4Q9EQM3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Nkx2-4Q9EQM3 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.35■■□□□ 1.81
Nkx2-4Q9EQM3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
Nkx2-4Q9EQM3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.34■■□□□ 1.81
Nkx2-4Q9EQM3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Nkx2-4Q9EQM3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Nkx2-4Q9EQM3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Nkx2-4Q9EQM3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.32■■□□□ 1.8
Nkx2-4Q9EQM3 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Nkx2-4Q9EQM3 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Nkx2-4Q9EQM3 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nkx2-4Q9EQM3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nkx2-4Q9EQM3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.3■■□□□ 1.8
Nkx2-4Q9EQM3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Nkx2-4Q9EQM3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Nkx2-4Q9EQM3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Nkx2-4Q9EQM3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Nkx2-4Q9EQM3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.28■■□□□ 1.8
Nkx2-4Q9EQM3 Mir6538-201ENSMUST00000183713 110 ntBASIC26.28■■□□□ 1.8
Nkx2-4Q9EQM3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Nkx2-4Q9EQM3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Nkx2-4Q9EQM3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Nkx2-4Q9EQM3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Nkx2-4Q9EQM3 Gm11175-201ENSMUST00000116172 543 ntBASIC26.26■■□□□ 1.79
Nkx2-4Q9EQM3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Nkx2-4Q9EQM3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nkx2-4Q9EQM3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nkx2-4Q9EQM3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nkx2-4Q9EQM3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nkx2-4Q9EQM3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nkx2-4Q9EQM3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Nkx2-4Q9EQM3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Nkx2-4Q9EQM3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Nkx2-4Q9EQM3 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Nkx2-4Q9EQM3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Nkx2-4Q9EQM3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.21■■□□□ 1.79
Nkx2-4Q9EQM3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Nkx2-4Q9EQM3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Nkx2-4Q9EQM3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nkx2-4Q9EQM3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Nkx2-4Q9EQM3 Cap2-205ENSMUST00000225824 1634 ntBASIC26.15■■□□□ 1.78
Nkx2-4Q9EQM3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
Nkx2-4Q9EQM3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Nkx2-4Q9EQM3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.12■■□□□ 1.77
Nkx2-4Q9EQM3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Nkx2-4Q9EQM3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.12■■□□□ 1.77
Nkx2-4Q9EQM3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nkx2-4Q9EQM3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Nkx2-4Q9EQM3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Nkx2-4Q9EQM3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.11■■□□□ 1.77
Nkx2-4Q9EQM3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nkx2-4Q9EQM3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nkx2-4Q9EQM3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Nkx2-4Q9EQM3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.09■■□□□ 1.77
Nkx2-4Q9EQM3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Nkx2-4Q9EQM3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Nkx2-4Q9EQM3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Nkx2-4Q9EQM3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.07■■□□□ 1.76
Nkx2-4Q9EQM3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nkx2-4Q9EQM3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Nkx2-4Q9EQM3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Nkx2-4Q9EQM3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
Nkx2-4Q9EQM3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.05■■□□□ 1.76
Nkx2-4Q9EQM3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.04■■□□□ 1.76
Nkx2-4Q9EQM3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Nkx2-4Q9EQM3 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
Nkx2-4Q9EQM3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.04■■□□□ 1.76
Nkx2-4Q9EQM3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.03■■□□□ 1.76
Nkx2-4Q9EQM3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Nkx2-4Q9EQM3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Nkx2-4Q9EQM3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Nkx2-4Q9EQM3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Nkx2-4Q9EQM3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nkx2-4Q9EQM3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Nkx2-4Q9EQM3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.98■■□□□ 1.75
Nkx2-4Q9EQM3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Nkx2-4Q9EQM3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Nkx2-4Q9EQM3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.94■■□□□ 1.74
Nkx2-4Q9EQM3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Nkx2-4Q9EQM3 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.91■■□□□ 1.74
Nkx2-4Q9EQM3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.91■■□□□ 1.74
Nkx2-4Q9EQM3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nkx2-4Q9EQM3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nkx2-4Q9EQM3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-4Q9EQM3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-4Q9EQM3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-4Q9EQM3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Nkx2-4Q9EQM3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.89■■□□□ 1.74
Nkx2-4Q9EQM3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Nkx2-4Q9EQM3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-4Q9EQM3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.88■■□□□ 1.73
Nkx2-4Q9EQM3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-4Q9EQM3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
Nkx2-4Q9EQM3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Nkx2-4Q9EQM3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nkx2-4Q9EQM3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.86■■□□□ 1.73
Nkx2-4Q9EQM3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms