Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Tmem54Q9D7S1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Tmem54Q9D7S1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tmem54Q9D7S1 Zxda-201ENSMUST00000117281 2621 ntBASIC21.88■■□□□ 1.09
Tmem54Q9D7S1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.87■■□□□ 1.09
Tmem54Q9D7S1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tmem54Q9D7S1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tmem54Q9D7S1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tmem54Q9D7S1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.86■■□□□ 1.09
Tmem54Q9D7S1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tmem54Q9D7S1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tmem54Q9D7S1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tmem54Q9D7S1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tmem54Q9D7S1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
Tmem54Q9D7S1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tmem54Q9D7S1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.81■■□□□ 1.08
Tmem54Q9D7S1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tmem54Q9D7S1 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tmem54Q9D7S1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tmem54Q9D7S1 Gm24970-201ENSMUST00000175582 82 ntBASIC21.8■■□□□ 1.08
Tmem54Q9D7S1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.79■■□□□ 1.08
Tmem54Q9D7S1 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.79■■□□□ 1.08
Tmem54Q9D7S1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tmem54Q9D7S1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tmem54Q9D7S1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tmem54Q9D7S1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Tmem54Q9D7S1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tmem54Q9D7S1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tmem54Q9D7S1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tmem54Q9D7S1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tmem54Q9D7S1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tmem54Q9D7S1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Tmem54Q9D7S1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tmem54Q9D7S1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Tmem54Q9D7S1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.73■■□□□ 1.07
Tmem54Q9D7S1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem54Q9D7S1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem54Q9D7S1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Tmem54Q9D7S1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tmem54Q9D7S1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tmem54Q9D7S1 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.72■■□□□ 1.07
Tmem54Q9D7S1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.72■■□□□ 1.07
Tmem54Q9D7S1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tmem54Q9D7S1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.72■■□□□ 1.07
Tmem54Q9D7S1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Tmem54Q9D7S1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tmem54Q9D7S1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.7■■□□□ 1.06
Tmem54Q9D7S1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Tmem54Q9D7S1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.7■■□□□ 1.06
Tmem54Q9D7S1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tmem54Q9D7S1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Tmem54Q9D7S1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.69■■□□□ 1.06
Tmem54Q9D7S1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tmem54Q9D7S1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmem54Q9D7S1 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.68■■□□□ 1.06
Tmem54Q9D7S1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tmem54Q9D7S1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmem54Q9D7S1 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.67■■□□□ 1.06
Tmem54Q9D7S1 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.66■■□□□ 1.06
Tmem54Q9D7S1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmem54Q9D7S1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmem54Q9D7S1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.64■■□□□ 1.06
Tmem54Q9D7S1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.64■■□□□ 1.06
Tmem54Q9D7S1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmem54Q9D7S1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmem54Q9D7S1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.64■■□□□ 1.05
Tmem54Q9D7S1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.63■■□□□ 1.05
Tmem54Q9D7S1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tmem54Q9D7S1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Tmem54Q9D7S1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmem54Q9D7S1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.61■■□□□ 1.05
Tmem54Q9D7S1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tmem54Q9D7S1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Tmem54Q9D7S1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tmem54Q9D7S1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem54Q9D7S1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Tmem54Q9D7S1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem54Q9D7S1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tmem54Q9D7S1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tmem54Q9D7S1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tmem54Q9D7S1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem54Q9D7S1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem54Q9D7S1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Tmem54Q9D7S1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem54Q9D7S1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem54Q9D7S1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem54Q9D7S1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.55■■□□□ 1.04
Tmem54Q9D7S1 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.55■■□□□ 1.04
Tmem54Q9D7S1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem54Q9D7S1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tmem54Q9D7S1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Tmem54Q9D7S1 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.52■■□□□ 1.04
Tmem54Q9D7S1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tmem54Q9D7S1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Tmem54Q9D7S1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem54Q9D7S1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.51■■□□□ 1.03
Tmem54Q9D7S1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.51■■□□□ 1.03
Tmem54Q9D7S1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem54Q9D7S1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Tmem54Q9D7S1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms