Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Cstf1Q99LC2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cstf1Q99LC2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cstf1Q99LC2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Cstf1Q99LC2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Cstf1Q99LC2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cstf1Q99LC2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cstf1Q99LC2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Cstf1Q99LC2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.03■■□□□ 1.6
Cstf1Q99LC2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cstf1Q99LC2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
Cstf1Q99LC2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cstf1Q99LC2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.02■■□□□ 1.6
Cstf1Q99LC2 Gm11599-201ENSMUST00000118720 878 ntBASIC25.01■■□□□ 1.59
Cstf1Q99LC2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
Cstf1Q99LC2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
Cstf1Q99LC2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cstf1Q99LC2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.98■■□□□ 1.59
Cstf1Q99LC2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cstf1Q99LC2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Cstf1Q99LC2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Cstf1Q99LC2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Cstf1Q99LC2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Cstf1Q99LC2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Cstf1Q99LC2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.95■■□□□ 1.58
Cstf1Q99LC2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.94■■□□□ 1.58
Cstf1Q99LC2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Cstf1Q99LC2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Cstf1Q99LC2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.93■■□□□ 1.58
Cstf1Q99LC2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.93■■□□□ 1.58
Cstf1Q99LC2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Cstf1Q99LC2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Cstf1Q99LC2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cstf1Q99LC2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cstf1Q99LC2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Cstf1Q99LC2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Cstf1Q99LC2 Mir6538-201ENSMUST00000183713 110 ntBASIC24.9■■□□□ 1.58
Cstf1Q99LC2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cstf1Q99LC2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Cstf1Q99LC2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cstf1Q99LC2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cstf1Q99LC2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Cstf1Q99LC2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Cstf1Q99LC2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.87■■□□□ 1.57
Cstf1Q99LC2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Cstf1Q99LC2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Cstf1Q99LC2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Cstf1Q99LC2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cstf1Q99LC2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cstf1Q99LC2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Cstf1Q99LC2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Cstf1Q99LC2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cstf1Q99LC2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Cstf1Q99LC2 Gm11175-201ENSMUST00000116172 543 ntBASIC24.82■■□□□ 1.56
Cstf1Q99LC2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Cstf1Q99LC2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Cstf1Q99LC2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cstf1Q99LC2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cstf1Q99LC2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cstf1Q99LC2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.77■■□□□ 1.56
Cstf1Q99LC2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cstf1Q99LC2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cstf1Q99LC2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
Cstf1Q99LC2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cstf1Q99LC2 Cap2-205ENSMUST00000225824 1634 ntBASIC24.75■■□□□ 1.55
Cstf1Q99LC2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Cstf1Q99LC2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
Cstf1Q99LC2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.75■■□□□ 1.55
Cstf1Q99LC2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Cstf1Q99LC2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Cstf1Q99LC2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Cstf1Q99LC2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Cstf1Q99LC2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.73■■□□□ 1.55
Cstf1Q99LC2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cstf1Q99LC2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cstf1Q99LC2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cstf1Q99LC2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Cstf1Q99LC2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.71■■□□□ 1.55
Cstf1Q99LC2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Cstf1Q99LC2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Cstf1Q99LC2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Cstf1Q99LC2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Cstf1Q99LC2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.69■■□□□ 1.54
Cstf1Q99LC2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.69■■□□□ 1.54
Cstf1Q99LC2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24.68■■□□□ 1.54
Cstf1Q99LC2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cstf1Q99LC2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC24.66■■□□□ 1.54
Cstf1Q99LC2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cstf1Q99LC2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Cstf1Q99LC2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.6■■□□□ 1.53
Cstf1Q99LC2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Cstf1Q99LC2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.6■■□□□ 1.53
Cstf1Q99LC2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.59■■□□□ 1.53
Cstf1Q99LC2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cstf1Q99LC2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Cstf1Q99LC2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Cstf1Q99LC2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.57■■□□□ 1.52
Cstf1Q99LC2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Cstf1Q99LC2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Cstf1Q99LC2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 111.5 ms