Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
Abca8bQ8K440 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC38.7■■■■□ 3.79
Abca8bQ8K440 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
Abca8bQ8K440 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC38.68■■■■□ 3.78
Abca8bQ8K440 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Abca8bQ8K440 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC38.67■■■■□ 3.78
Abca8bQ8K440 Gm7432-201ENSMUST00000210343 879 ntBASIC38.67■■■■□ 3.78
Abca8bQ8K440 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC38.65■■■■□ 3.78
Abca8bQ8K440 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC38.64■■■■□ 3.78
Abca8bQ8K440 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC38.64■■■■□ 3.78
Abca8bQ8K440 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC38.64■■■■□ 3.78
Abca8bQ8K440 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC38.63■■■■□ 3.78
Abca8bQ8K440 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
Abca8bQ8K440 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC38.61■■■■□ 3.77
Abca8bQ8K440 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC38.59■■■■□ 3.77
Abca8bQ8K440 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
Abca8bQ8K440 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC38.54■■■■□ 3.76
Abca8bQ8K440 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC38.52■■■■□ 3.76
Abca8bQ8K440 Gm11599-201ENSMUST00000118720 878 ntBASIC38.5■■■■□ 3.75
Abca8bQ8K440 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC38.5■■■■□ 3.75
Abca8bQ8K440 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC38.5■■■■□ 3.75
Abca8bQ8K440 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
Abca8bQ8K440 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC38.49■■■■□ 3.75
Abca8bQ8K440 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC38.49■■■■□ 3.75
Abca8bQ8K440 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
Abca8bQ8K440 Gm30346-201ENSMUST00000218641 1699 ntBASIC38.47■■■■□ 3.75
Abca8bQ8K440 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC38.47■■■■□ 3.75
Abca8bQ8K440 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC38.47■■■■□ 3.75
Abca8bQ8K440 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
Abca8bQ8K440 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC38.47■■■■□ 3.75
Abca8bQ8K440 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
Abca8bQ8K440 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Abca8bQ8K440 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Abca8bQ8K440 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Abca8bQ8K440 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Abca8bQ8K440 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Abca8bQ8K440 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC38.45■■■■□ 3.75
Abca8bQ8K440 Mir6538-201ENSMUST00000183713 110 ntBASIC38.45■■■■□ 3.75
Abca8bQ8K440 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC38.43■■■■□ 3.74
Abca8bQ8K440 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
Abca8bQ8K440 Gm11175-201ENSMUST00000116172 543 ntBASIC38.42■■■■□ 3.74
Abca8bQ8K440 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Abca8bQ8K440 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
Abca8bQ8K440 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC38.4■■■■□ 3.74
Abca8bQ8K440 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
Abca8bQ8K440 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
Abca8bQ8K440 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC38.35■■■■□ 3.73
Abca8bQ8K440 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
Abca8bQ8K440 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC38.34■■■■□ 3.73
Abca8bQ8K440 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC38.33■■■■□ 3.73
Abca8bQ8K440 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC38.32■■■■□ 3.72
Abca8bQ8K440 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC38.31■■■■□ 3.72
Abca8bQ8K440 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC38.31■■■■□ 3.72
Abca8bQ8K440 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC38.3■■■■□ 3.72
Abca8bQ8K440 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC38.27■■■■□ 3.72
Abca8bQ8K440 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
Abca8bQ8K440 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC38.24■■■■□ 3.71
Abca8bQ8K440 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC38.24■■■■□ 3.71
Abca8bQ8K440 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC38.23■■■■□ 3.71
Abca8bQ8K440 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
Abca8bQ8K440 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Abca8bQ8K440 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Abca8bQ8K440 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Abca8bQ8K440 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
Abca8bQ8K440 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC38.19■■■■□ 3.7
Abca8bQ8K440 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.16■■■■□ 3.7
Abca8bQ8K440 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Abca8bQ8K440 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC38.16■■■■□ 3.7
Abca8bQ8K440 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Abca8bQ8K440 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC38.16■■■■□ 3.7
Abca8bQ8K440 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC38.16■■■■□ 3.7
Abca8bQ8K440 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC38.14■■■■□ 3.7
Abca8bQ8K440 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC38.14■■■■□ 3.7
Abca8bQ8K440 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
Abca8bQ8K440 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
Abca8bQ8K440 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
Abca8bQ8K440 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC38.11■■■■□ 3.69
Abca8bQ8K440 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC38.11■■■■□ 3.69
Abca8bQ8K440 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC38.09■■■■□ 3.69
Abca8bQ8K440 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC38.08■■■■□ 3.69
Abca8bQ8K440 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
Abca8bQ8K440 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC38.06■■■■□ 3.68
Abca8bQ8K440 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC38.05■■■■□ 3.68
Abca8bQ8K440 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC38.05■■■■□ 3.68
Abca8bQ8K440 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC38.05■■■■□ 3.68
Abca8bQ8K440 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC38.04■■■■□ 3.68
Abca8bQ8K440 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Abca8bQ8K440 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC38.01■■■■□ 3.68
Abca8bQ8K440 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC38.01■■■■□ 3.68
Abca8bQ8K440 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC37.99■■■■□ 3.67
Abca8bQ8K440 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
Abca8bQ8K440 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Abca8bQ8K440 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC37.98■■■■□ 3.67
Abca8bQ8K440 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC37.98■■■■□ 3.67
Abca8bQ8K440 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Abca8bQ8K440 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC37.94■■■■□ 3.66
Abca8bQ8K440 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC37.94■■■■□ 3.66
Abca8bQ8K440 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC37.94■■■■□ 3.66
Abca8bQ8K440 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC37.94■■■■□ 3.66
Abca8bQ8K440 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC37.94■■■■□ 3.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms