Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Uba3Q8C878 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC26.26■■□□□ 1.79
Uba3Q8C878 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Uba3Q8C878 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC26.25■■□□□ 1.79
Uba3Q8C878 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Uba3Q8C878 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Uba3Q8C878 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Uba3Q8C878 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Uba3Q8C878 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Uba3Q8C878 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Uba3Q8C878 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.19■■□□□ 1.78
Uba3Q8C878 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Uba3Q8C878 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Uba3Q8C878 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Uba3Q8C878 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Uba3Q8C878 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.17■■□□□ 1.78
Uba3Q8C878 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Uba3Q8C878 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.16■■□□□ 1.78
Uba3Q8C878 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Uba3Q8C878 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Uba3Q8C878 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Uba3Q8C878 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Uba3Q8C878 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Uba3Q8C878 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Uba3Q8C878 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uba3Q8C878 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Uba3Q8C878 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.12■■□□□ 1.77
Uba3Q8C878 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Uba3Q8C878 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.12■■□□□ 1.77
Uba3Q8C878 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Uba3Q8C878 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.11■■□□□ 1.77
Uba3Q8C878 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Uba3Q8C878 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Uba3Q8C878 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Uba3Q8C878 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
Uba3Q8C878 Gm24970-201ENSMUST00000175582 82 ntBASIC26.08■■□□□ 1.77
Uba3Q8C878 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.08■■□□□ 1.77
Uba3Q8C878 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.08■■□□□ 1.77
Uba3Q8C878 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
Uba3Q8C878 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Uba3Q8C878 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Uba3Q8C878 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Uba3Q8C878 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
Uba3Q8C878 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
Uba3Q8C878 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Uba3Q8C878 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Uba3Q8C878 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.05■■□□□ 1.76
Uba3Q8C878 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Uba3Q8C878 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Uba3Q8C878 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.04■■□□□ 1.76
Uba3Q8C878 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.03■■□□□ 1.76
Uba3Q8C878 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Uba3Q8C878 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.02■■□□□ 1.76
Uba3Q8C878 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Uba3Q8C878 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.01■■□□□ 1.75
Uba3Q8C878 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26■■□□□ 1.75
Uba3Q8C878 Gm9905-201ENSMUST00000065740 1845 ntBASIC26■■□□□ 1.75
Uba3Q8C878 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26■■□□□ 1.75
Uba3Q8C878 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26■■□□□ 1.75
Uba3Q8C878 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Uba3Q8C878 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Uba3Q8C878 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Uba3Q8C878 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Uba3Q8C878 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Uba3Q8C878 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Uba3Q8C878 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.98■■□□□ 1.75
Uba3Q8C878 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.97■■□□□ 1.75
Uba3Q8C878 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Uba3Q8C878 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Uba3Q8C878 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.96■■□□□ 1.75
Uba3Q8C878 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Uba3Q8C878 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.96■■□□□ 1.75
Uba3Q8C878 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Uba3Q8C878 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Uba3Q8C878 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Uba3Q8C878 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Uba3Q8C878 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Uba3Q8C878 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Uba3Q8C878 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC25.91■■□□□ 1.74
Uba3Q8C878 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.9■■□□□ 1.74
Uba3Q8C878 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Uba3Q8C878 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC25.89■■□□□ 1.74
Uba3Q8C878 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Uba3Q8C878 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Uba3Q8C878 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Uba3Q8C878 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Uba3Q8C878 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Uba3Q8C878 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Uba3Q8C878 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.86■■□□□ 1.73
Uba3Q8C878 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Uba3Q8C878 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Uba3Q8C878 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Uba3Q8C878 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.84■■□□□ 1.73
Uba3Q8C878 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
Uba3Q8C878 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Uba3Q8C878 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Uba3Q8C878 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Uba3Q8C878 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Uba3Q8C878 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Uba3Q8C878 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC25.81■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms