Protein–RNA interactions for Protein: Q8C407

Yipf4, Protein YIPF4, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yipf4Q8C407 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Yipf4Q8C407 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.18■■□□□ 1.46
Yipf4Q8C407 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Yipf4Q8C407 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Yipf4Q8C407 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Yipf4Q8C407 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Yipf4Q8C407 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.16■■□□□ 1.46
Yipf4Q8C407 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Yipf4Q8C407 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Yipf4Q8C407 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Yipf4Q8C407 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Yipf4Q8C407 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Yipf4Q8C407 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Yipf4Q8C407 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Yipf4Q8C407 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Yipf4Q8C407 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Yipf4Q8C407 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Yipf4Q8C407 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.1■■□□□ 1.45
Yipf4Q8C407 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Yipf4Q8C407 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.09■■□□□ 1.45
Yipf4Q8C407 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Yipf4Q8C407 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Yipf4Q8C407 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Yipf4Q8C407 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Yipf4Q8C407 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Yipf4Q8C407 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Yipf4Q8C407 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Yipf4Q8C407 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Yipf4Q8C407 Gm6821-201ENSMUST00000107540 542 ntBASIC24.05■■□□□ 1.44
Yipf4Q8C407 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
Yipf4Q8C407 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Yipf4Q8C407 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Yipf4Q8C407 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Yipf4Q8C407 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.02■■□□□ 1.44
Yipf4Q8C407 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Yipf4Q8C407 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Yipf4Q8C407 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Yipf4Q8C407 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Yipf4Q8C407 Gm8503-201ENSMUST00000118131 455 ntBASIC24.01■■□□□ 1.43
Yipf4Q8C407 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24■■□□□ 1.43
Yipf4Q8C407 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Yipf4Q8C407 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Yipf4Q8C407 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.99■■□□□ 1.43
Yipf4Q8C407 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Yipf4Q8C407 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Yipf4Q8C407 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Yipf4Q8C407 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Yipf4Q8C407 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Yipf4Q8C407 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Yipf4Q8C407 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Yipf4Q8C407 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Yipf4Q8C407 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.95■■□□□ 1.42
Yipf4Q8C407 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Yipf4Q8C407 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.94■■□□□ 1.42
Yipf4Q8C407 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Yipf4Q8C407 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Yipf4Q8C407 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.93■■□□□ 1.42
Yipf4Q8C407 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Yipf4Q8C407 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Yipf4Q8C407 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Yipf4Q8C407 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Yipf4Q8C407 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Yipf4Q8C407 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Yipf4Q8C407 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.9■■□□□ 1.42
Yipf4Q8C407 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.9■■□□□ 1.42
Yipf4Q8C407 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Yipf4Q8C407 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Yipf4Q8C407 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Yipf4Q8C407 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Yipf4Q8C407 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.87■■□□□ 1.41
Yipf4Q8C407 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Yipf4Q8C407 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Yipf4Q8C407 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Yipf4Q8C407 Zxda-201ENSMUST00000117281 2621 ntBASIC23.85■■□□□ 1.41
Yipf4Q8C407 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Yipf4Q8C407 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Yipf4Q8C407 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Yipf4Q8C407 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Yipf4Q8C407 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.83■■□□□ 1.41
Yipf4Q8C407 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Yipf4Q8C407 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Yipf4Q8C407 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.82■■□□□ 1.4
Yipf4Q8C407 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Yipf4Q8C407 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.8■■□□□ 1.4
Yipf4Q8C407 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Yipf4Q8C407 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Yipf4Q8C407 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Yipf4Q8C407 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Yipf4Q8C407 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Yipf4Q8C407 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Yipf4Q8C407 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Yipf4Q8C407 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Yipf4Q8C407 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Yipf4Q8C407 Nkain2-201ENSMUST00000092602 558 ntBASIC23.76■■□□□ 1.39
Yipf4Q8C407 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Yipf4Q8C407 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Yipf4Q8C407 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Yipf4Q8C407 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Yipf4Q8C407 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.75■■□□□ 1.39
Yipf4Q8C407 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms