Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pum3Q8BKS9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Pum3Q8BKS9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pum3Q8BKS9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pum3Q8BKS9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.39■■□□□ 1.82
Pum3Q8BKS9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Pum3Q8BKS9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pum3Q8BKS9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pum3Q8BKS9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pum3Q8BKS9 Gm24970-201ENSMUST00000175582 82 ntBASIC26.37■■□□□ 1.81
Pum3Q8BKS9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Pum3Q8BKS9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.36■■□□□ 1.81
Pum3Q8BKS9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Pum3Q8BKS9 Gm43863-201ENSMUST00000203822 1192 ntBASIC26.35■■□□□ 1.81
Pum3Q8BKS9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pum3Q8BKS9 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Pum3Q8BKS9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pum3Q8BKS9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Pum3Q8BKS9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Pum3Q8BKS9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pum3Q8BKS9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Pum3Q8BKS9 Zxda-201ENSMUST00000117281 2621 ntBASIC26.31■■□□□ 1.8
Pum3Q8BKS9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pum3Q8BKS9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pum3Q8BKS9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pum3Q8BKS9 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.3■■□□□ 1.8
Pum3Q8BKS9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.3■■□□□ 1.8
Pum3Q8BKS9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
Pum3Q8BKS9 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pum3Q8BKS9 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
Pum3Q8BKS9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pum3Q8BKS9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.25■■□□□ 1.79
Pum3Q8BKS9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Pum3Q8BKS9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Pum3Q8BKS9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Pum3Q8BKS9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
Pum3Q8BKS9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.23■■□□□ 1.79
Pum3Q8BKS9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pum3Q8BKS9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pum3Q8BKS9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Pum3Q8BKS9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.21■■□□□ 1.79
Pum3Q8BKS9 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.21■■□□□ 1.79
Pum3Q8BKS9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Pum3Q8BKS9 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Pum3Q8BKS9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pum3Q8BKS9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Pum3Q8BKS9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Pum3Q8BKS9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Pum3Q8BKS9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.17■■□□□ 1.78
Pum3Q8BKS9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Pum3Q8BKS9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.17■■□□□ 1.78
Pum3Q8BKS9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.16■■□□□ 1.78
Pum3Q8BKS9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Pum3Q8BKS9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Pum3Q8BKS9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Pum3Q8BKS9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Pum3Q8BKS9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.12■■□□□ 1.77
Pum3Q8BKS9 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.12■■□□□ 1.77
Pum3Q8BKS9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.12■■□□□ 1.77
Pum3Q8BKS9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Pum3Q8BKS9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Pum3Q8BKS9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pum3Q8BKS9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pum3Q8BKS9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pum3Q8BKS9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pum3Q8BKS9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pum3Q8BKS9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.09■■□□□ 1.77
Pum3Q8BKS9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pum3Q8BKS9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Pum3Q8BKS9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.07■■□□□ 1.76
Pum3Q8BKS9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Pum3Q8BKS9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.06■■□□□ 1.76
Pum3Q8BKS9 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.05■■□□□ 1.76
Pum3Q8BKS9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Pum3Q8BKS9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
Pum3Q8BKS9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.05■■□□□ 1.76
Pum3Q8BKS9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pum3Q8BKS9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Pum3Q8BKS9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pum3Q8BKS9 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.04■■□□□ 1.76
Pum3Q8BKS9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Pum3Q8BKS9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Pum3Q8BKS9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Pum3Q8BKS9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.02■■□□□ 1.76
Pum3Q8BKS9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pum3Q8BKS9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
Pum3Q8BKS9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26■■□□□ 1.75
Pum3Q8BKS9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pum3Q8BKS9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Pum3Q8BKS9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pum3Q8BKS9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Pum3Q8BKS9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Pum3Q8BKS9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC25.95■■□□□ 1.74
Pum3Q8BKS9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Pum3Q8BKS9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.95■■□□□ 1.74
Pum3Q8BKS9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pum3Q8BKS9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pum3Q8BKS9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pum3Q8BKS9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pum3Q8BKS9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC25.94■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms