Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Srrm4Q8BKA3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Srrm4Q8BKA3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.43■■□□□ 1.02
Srrm4Q8BKA3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm4Q8BKA3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Srrm4Q8BKA3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Srrm4Q8BKA3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Srrm4Q8BKA3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Srrm4Q8BKA3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm4Q8BKA3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm4Q8BKA3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm4Q8BKA3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Srrm4Q8BKA3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.4■■□□□ 1.02
Srrm4Q8BKA3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Srrm4Q8BKA3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Srrm4Q8BKA3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Srrm4Q8BKA3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Srrm4Q8BKA3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.39■■□□□ 1.01
Srrm4Q8BKA3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Srrm4Q8BKA3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Srrm4Q8BKA3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Srrm4Q8BKA3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Srrm4Q8BKA3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Srrm4Q8BKA3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Srrm4Q8BKA3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Srrm4Q8BKA3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.35■■□□□ 1.01
Srrm4Q8BKA3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Srrm4Q8BKA3 Gm24970-201ENSMUST00000175582 82 ntBASIC21.34■■□□□ 1.01
Srrm4Q8BKA3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Srrm4Q8BKA3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Srrm4Q8BKA3 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.33■■□□□ 1.01
Srrm4Q8BKA3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Srrm4Q8BKA3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Srrm4Q8BKA3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Srrm4Q8BKA3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Srrm4Q8BKA3 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.31■■□□□ 1
Srrm4Q8BKA3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Srrm4Q8BKA3 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.31■■□□□ 1
Srrm4Q8BKA3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.31■■□□□ 1
Srrm4Q8BKA3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srrm4Q8BKA3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Srrm4Q8BKA3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Srrm4Q8BKA3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Srrm4Q8BKA3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Srrm4Q8BKA3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Srrm4Q8BKA3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.28■■□□□ 1
Srrm4Q8BKA3 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.28■■□□□ 1
Srrm4Q8BKA3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Srrm4Q8BKA3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.27■■□□□ 1
Srrm4Q8BKA3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.27■■□□□ 1
Srrm4Q8BKA3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srrm4Q8BKA3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.25■□□□□ 0.99
Srrm4Q8BKA3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srrm4Q8BKA3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srrm4Q8BKA3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Srrm4Q8BKA3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Srrm4Q8BKA3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Srrm4Q8BKA3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srrm4Q8BKA3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srrm4Q8BKA3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srrm4Q8BKA3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Srrm4Q8BKA3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Srrm4Q8BKA3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.23■□□□□ 0.99
Srrm4Q8BKA3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srrm4Q8BKA3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srrm4Q8BKA3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Srrm4Q8BKA3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Srrm4Q8BKA3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srrm4Q8BKA3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Srrm4Q8BKA3 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Srrm4Q8BKA3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Srrm4Q8BKA3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srrm4Q8BKA3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Srrm4Q8BKA3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Srrm4Q8BKA3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Srrm4Q8BKA3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Srrm4Q8BKA3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.18■□□□□ 0.98
Srrm4Q8BKA3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Srrm4Q8BKA3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Srrm4Q8BKA3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.16■□□□□ 0.98
Srrm4Q8BKA3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srrm4Q8BKA3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Srrm4Q8BKA3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Srrm4Q8BKA3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Srrm4Q8BKA3 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.14■□□□□ 0.97
Srrm4Q8BKA3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srrm4Q8BKA3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm4Q8BKA3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm4Q8BKA3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm4Q8BKA3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm4Q8BKA3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm4Q8BKA3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Srrm4Q8BKA3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms