Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Prpf38bQ80SY5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Prpf38bQ80SY5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Prpf38bQ80SY5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf38bQ80SY5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf38bQ80SY5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
Prpf38bQ80SY5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prpf38bQ80SY5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.7■■□□□ 1.7
Prpf38bQ80SY5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.7■■□□□ 1.7
Prpf38bQ80SY5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
Prpf38bQ80SY5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
Prpf38bQ80SY5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Prpf38bQ80SY5 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.67■■□□□ 1.7
Prpf38bQ80SY5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Prpf38bQ80SY5 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Prpf38bQ80SY5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Prpf38bQ80SY5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Prpf38bQ80SY5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf38bQ80SY5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prpf38bQ80SY5 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.61■■□□□ 1.69
Prpf38bQ80SY5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Prpf38bQ80SY5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf38bQ80SY5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Prpf38bQ80SY5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf38bQ80SY5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Prpf38bQ80SY5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.59■■□□□ 1.69
Prpf38bQ80SY5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Prpf38bQ80SY5 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Prpf38bQ80SY5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.57■■□□□ 1.68
Prpf38bQ80SY5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Prpf38bQ80SY5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Prpf38bQ80SY5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Prpf38bQ80SY5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Prpf38bQ80SY5 Gm11599-201ENSMUST00000118720 878 ntBASIC25.55■■□□□ 1.68
Prpf38bQ80SY5 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.55■■□□□ 1.68
Prpf38bQ80SY5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Prpf38bQ80SY5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Prpf38bQ80SY5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.53■■□□□ 1.68
Prpf38bQ80SY5 Nkain2-201ENSMUST00000092602 558 ntBASIC25.53■■□□□ 1.68
Prpf38bQ80SY5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
Prpf38bQ80SY5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf38bQ80SY5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf38bQ80SY5 Cap2-205ENSMUST00000225824 1634 ntBASIC25.52■■□□□ 1.68
Prpf38bQ80SY5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf38bQ80SY5 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.51■■□□□ 1.67
Prpf38bQ80SY5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Prpf38bQ80SY5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Prpf38bQ80SY5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Prpf38bQ80SY5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf38bQ80SY5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf38bQ80SY5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Prpf38bQ80SY5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Gm11175-201ENSMUST00000116172 543 ntBASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Prpf38bQ80SY5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Prpf38bQ80SY5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Prpf38bQ80SY5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Gm15039-201ENSMUST00000118914 875 ntBASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.42■■□□□ 1.66
Prpf38bQ80SY5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Prpf38bQ80SY5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Prpf38bQ80SY5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.39■■□□□ 1.66
Prpf38bQ80SY5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Prpf38bQ80SY5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Prpf38bQ80SY5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Prpf38bQ80SY5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
Prpf38bQ80SY5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.33■■□□□ 1.65
Prpf38bQ80SY5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Prpf38bQ80SY5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.3■■□□□ 1.64
Prpf38bQ80SY5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.28■■□□□ 1.64
Prpf38bQ80SY5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Prpf38bQ80SY5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms