Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm11175-201ENSMUST00000116172 543 ntBASIC28.24■■■□□ 2.11
ShbQ6PD21 Mir6538-201ENSMUST00000183713 110 ntBASIC28.24■■■□□ 2.11
ShbQ6PD21 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
ShbQ6PD21 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ShbQ6PD21 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.22■■■□□ 2.11
ShbQ6PD21 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
ShbQ6PD21 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.21■■■□□ 2.11
ShbQ6PD21 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.21■■■□□ 2.11
ShbQ6PD21 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
ShbQ6PD21 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
ShbQ6PD21 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
ShbQ6PD21 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.17■■■□□ 2.1
ShbQ6PD21 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ShbQ6PD21 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
ShbQ6PD21 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
ShbQ6PD21 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.15■■■□□ 2.1
ShbQ6PD21 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ShbQ6PD21 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
ShbQ6PD21 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
ShbQ6PD21 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ShbQ6PD21 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ShbQ6PD21 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ShbQ6PD21 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
ShbQ6PD21 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.11■■■□□ 2.09
ShbQ6PD21 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.11■■■□□ 2.09
ShbQ6PD21 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
ShbQ6PD21 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
ShbQ6PD21 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ShbQ6PD21 Cap2-205ENSMUST00000225824 1634 ntBASIC28.1■■■□□ 2.09
ShbQ6PD21 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ShbQ6PD21 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ShbQ6PD21 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ShbQ6PD21 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
ShbQ6PD21 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ShbQ6PD21 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ShbQ6PD21 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.06■■■□□ 2.08
ShbQ6PD21 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
ShbQ6PD21 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ShbQ6PD21 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ShbQ6PD21 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ShbQ6PD21 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ShbQ6PD21 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.03■■■□□ 2.08
ShbQ6PD21 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
ShbQ6PD21 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ShbQ6PD21 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ShbQ6PD21 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ShbQ6PD21 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28■■■□□ 2.07
ShbQ6PD21 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28■■■□□ 2.07
ShbQ6PD21 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.99■■■□□ 2.07
ShbQ6PD21 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.99■■■□□ 2.07
ShbQ6PD21 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
ShbQ6PD21 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
ShbQ6PD21 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.97■■■□□ 2.07
ShbQ6PD21 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ShbQ6PD21 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ShbQ6PD21 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ShbQ6PD21 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ShbQ6PD21 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
ShbQ6PD21 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ShbQ6PD21 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ShbQ6PD21 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
ShbQ6PD21 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.93■■■□□ 2.06
ShbQ6PD21 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
ShbQ6PD21 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.91■■■□□ 2.06
ShbQ6PD21 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
ShbQ6PD21 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
ShbQ6PD21 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
ShbQ6PD21 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
ShbQ6PD21 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
ShbQ6PD21 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
ShbQ6PD21 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ShbQ6PD21 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.86■■■□□ 2.05
ShbQ6PD21 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.85■■■□□ 2.05
ShbQ6PD21 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.84■■■□□ 2.05
ShbQ6PD21 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
ShbQ6PD21 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
ShbQ6PD21 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
ShbQ6PD21 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
ShbQ6PD21 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.81■■■□□ 2.04
ShbQ6PD21 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
ShbQ6PD21 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
ShbQ6PD21 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.81■■■□□ 2.04
ShbQ6PD21 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ShbQ6PD21 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ShbQ6PD21 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
ShbQ6PD21 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.79■■■□□ 2.04
ShbQ6PD21 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.78■■■□□ 2.04
ShbQ6PD21 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ShbQ6PD21 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ShbQ6PD21 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.75■■■□□ 2.03
ShbQ6PD21 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.75■■■□□ 2.03
ShbQ6PD21 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
ShbQ6PD21 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
ShbQ6PD21 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
ShbQ6PD21 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
ShbQ6PD21 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.7■■■□□ 2.02
ShbQ6PD21 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
ShbQ6PD21 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
ShbQ6PD21 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ShbQ6PD21 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms