Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Lama5Q61001 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lama5Q61001 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lama5Q61001 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Lama5Q61001 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.3■■□□□ 1.16
Lama5Q61001 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lama5Q61001 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.3■■□□□ 1.16
Lama5Q61001 Nkain2-201ENSMUST00000092602 558 ntBASIC22.28■■□□□ 1.16
Lama5Q61001 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lama5Q61001 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lama5Q61001 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lama5Q61001 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Lama5Q61001 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lama5Q61001 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.24■■□□□ 1.15
Lama5Q61001 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Lama5Q61001 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lama5Q61001 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lama5Q61001 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lama5Q61001 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Lama5Q61001 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
Lama5Q61001 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Lama5Q61001 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lama5Q61001 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.2■■□□□ 1.14
Lama5Q61001 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lama5Q61001 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lama5Q61001 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lama5Q61001 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
Lama5Q61001 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Lama5Q61001 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lama5Q61001 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lama5Q61001 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lama5Q61001 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lama5Q61001 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lama5Q61001 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lama5Q61001 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lama5Q61001 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lama5Q61001 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lama5Q61001 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.13■■□□□ 1.13
Lama5Q61001 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lama5Q61001 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Lama5Q61001 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lama5Q61001 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Lama5Q61001 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.09■■□□□ 1.13
Lama5Q61001 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Lama5Q61001 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Lama5Q61001 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Lama5Q61001 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lama5Q61001 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lama5Q61001 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Lama5Q61001 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Lama5Q61001 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lama5Q61001 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.04■■□□□ 1.12
Lama5Q61001 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Lama5Q61001 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lama5Q61001 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.03■■□□□ 1.12
Lama5Q61001 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Lama5Q61001 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.03■■□□□ 1.12
Lama5Q61001 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lama5Q61001 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.01■■□□□ 1.11
Lama5Q61001 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22■■□□□ 1.11
Lama5Q61001 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lama5Q61001 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lama5Q61001 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Lama5Q61001 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Lama5Q61001 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.98■■□□□ 1.11
Lama5Q61001 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
Lama5Q61001 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Lama5Q61001 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.97■■□□□ 1.11
Lama5Q61001 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Lama5Q61001 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lama5Q61001 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Lama5Q61001 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Lama5Q61001 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lama5Q61001 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lama5Q61001 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Lama5Q61001 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lama5Q61001 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lama5Q61001 Gm15039-201ENSMUST00000118914 875 ntBASIC21.94■■□□□ 1.1
Lama5Q61001 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Lama5Q61001 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lama5Q61001 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Lama5Q61001 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lama5Q61001 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.91■■□□□ 1.1
Lama5Q61001 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lama5Q61001 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.91■■□□□ 1.1
Lama5Q61001 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.91■■□□□ 1.1
Lama5Q61001 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Lama5Q61001 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lama5Q61001 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lama5Q61001 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.87■■□□□ 1.09
Lama5Q61001 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.87■■□□□ 1.09
Lama5Q61001 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.87■■□□□ 1.09
Lama5Q61001 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lama5Q61001 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lama5Q61001 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lama5Q61001 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Lama5Q61001 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lama5Q61001 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lama5Q61001 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Lama5Q61001 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms