Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 SWM1YDR260C 513 nt10□□□□□ -0.81
VPS13Q07878 CTI6YPL181W 1521 nt9.99□□□□□ -0.81
VPS13Q07878 YJL118WYJL118W 660 nt9.98□□□□□ -0.81
VPS13Q07878 SPG1YGR236C 288 nt9.98□□□□□ -0.81
VPS13Q07878 SAM3YPL274W 1764 nt9.98□□□□□ -0.81
VPS13Q07878 YAR028WYAR028W 705 nt9.98□□□□□ -0.81
VPS13Q07878 DIF1YLR437C 402 nt9.97□□□□□ -0.81
VPS13Q07878 IGD1YFR017C 588 nt9.96□□□□□ -0.81
VPS13Q07878 YMR007WYMR007W 381 nt9.96□□□□□ -0.82
VPS13Q07878 ASP3-1YLR155C 1089 nt9.94□□□□□ -0.82
VPS13Q07878 ASP3-2YLR157C 1089 nt9.94□□□□□ -0.82
VPS13Q07878 ASP3-3YLR158C 1089 nt9.94□□□□□ -0.82
VPS13Q07878 ASP3-4YLR160C 1089 nt9.94□□□□□ -0.82
VPS13Q07878 MHF1YOL086W-A 273 nt9.94□□□□□ -0.82
VPS13Q07878 BOP3YNL042W 1191 nt9.93□□□□□ -0.82
VPS13Q07878 AKR2YOR034C 2250 nt9.93□□□□□ -0.82
VPS13Q07878 YPR126CYPR126C 309 nt9.93□□□□□ -0.82
VPS13Q07878 STR3YGL184C 1398 nt9.92□□□□□ -0.82
VPS13Q07878 GRH1YDR517W 1119 nt9.9□□□□□ -0.82
VPS13Q07878 IPL1YPL209C 1104 nt9.9□□□□□ -0.82
VPS13Q07878 CDD1YLR245C 429 nt9.89□□□□□ -0.83
VPS13Q07878 LYS20YDL182W 1287 nt9.88□□□□□ -0.83
VPS13Q07878 YMR210WYMR210W 1350 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)DtA(AGC)D 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)FtA(AGC)F 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)GtA(AGC)G 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)HtA(AGC)H 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)JtA(AGC)J 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)K1tA(AGC)K1 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)K2tA(AGC)K2 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)LtA(AGC)L 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)M1tA(AGC)M1 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)M2tA(AGC)M2 73 nt9.87□□□□□ -0.83
VPS13Q07878 tA(AGC)PtA(AGC)P 73 nt9.87□□□□□ -0.83
VPS13Q07878 ARP6YLR085C 1317 nt9.87□□□□□ -0.83
VPS13Q07878 PCP1YGR101W 1041 nt9.87□□□□□ -0.83
VPS13Q07878 TGA1tA(UGC)A 73 nt9.85□□□□□ -0.83
VPS13Q07878 tA(UGC)EtA(UGC)E 73 nt9.85□□□□□ -0.83
VPS13Q07878 tA(UGC)GtA(UGC)G 73 nt9.85□□□□□ -0.83
VPS13Q07878 tA(UGC)LtA(UGC)L 73 nt9.85□□□□□ -0.83
VPS13Q07878 tA(UGC)OtA(UGC)O 73 nt9.85□□□□□ -0.83
VPS13Q07878 PRE5YMR314W 705 nt9.85□□□□□ -0.83
VPS13Q07878 YPL251WYPL251W 303 nt9.82□□□□□ -0.84
VPS13Q07878 UTR1YJR049C 1593 nt9.81□□□□□ -0.84
VPS13Q07878 SWE1YJL187C 2460 nt9.8□□□□□ -0.84
VPS13Q07878 HIF1YLL022C 1158 nt9.79□□□□□ -0.84
VPS13Q07878 DUS1YML080W 1272 nt9.78□□□□□ -0.84
VPS13Q07878 OYE3YPL171C 1203 nt9.78□□□□□ -0.84
VPS13Q07878 YER190C-AYER190C-A 576 nt9.78□□□□□ -0.84
VPS13Q07878 YGR296C-AYGR296C-A 576 nt9.78□□□□□ -0.84
VPS13Q07878 NUC1YJL208C 990 nt9.78□□□□□ -0.84
VPS13Q07878 YML133W-AYML133W-A 576 nt9.78□□□□□ -0.84
VPS13Q07878 YNL339W-AYNL339W-A 576 nt9.78□□□□□ -0.84
VPS13Q07878 YPL283W-AYPL283W-A 576 nt9.78□□□□□ -0.84
VPS13Q07878 SDH8YBR269C 417 nt9.77□□□□□ -0.85
VPS13Q07878 BAP3YDR046C 1815 nt9.76□□□□□ -0.85
VPS13Q07878 NAS2YIL007C 663 nt9.76□□□□□ -0.85
VPS13Q07878 SED1YDR077W 1017 nt9.76□□□□□ -0.85
VPS13Q07878 HRA1HRA1 564 nt9.75□□□□□ -0.85
VPS13Q07878 NIF3YGL221C 867 nt9.74□□□□□ -0.85
VPS13Q07878 SSN3YPL042C 1668 nt9.73□□□□□ -0.85
VPS13Q07878 RCR1YBR005W 642 nt9.73□□□□□ -0.85
VPS13Q07878 MEP3YPR138C 1470 nt9.72□□□□□ -0.85
VPS13Q07878 FLX1YIL134W 936 nt9.71□□□□□ -0.86
VPS13Q07878 CSM1YCR086W 573 nt9.7□□□□□ -0.86
VPS13Q07878 YBL086CYBL086C 1401 nt9.69□□□□□ -0.86
VPS13Q07878 RIB7YBR153W 735 nt9.69□□□□□ -0.86
VPS13Q07878 SPE2YOL052C 1191 nt9.68□□□□□ -0.86
VPS13Q07878 TPS1YBR126C 1488 nt9.67□□□□□ -0.86
VPS13Q07878 DBP1YPL119C 1854 nt9.67□□□□□ -0.86
VPS13Q07878 DAK2YFL053W 1776 nt9.66□□□□□ -0.86
VPS13Q07878 RTN2YDL204W 1182 nt9.66□□□□□ -0.86
VPS13Q07878 AVO2YMR068W 1281 nt9.66□□□□□ -0.86
VPS13Q07878 ADH3YMR083W 1128 nt9.65□□□□□ -0.86
VPS13Q07878 EDC2YER035W 438 nt9.65□□□□□ -0.86
VPS13Q07878 tL(UAA)B1tL(UAA)B1 84 nt9.65□□□□□ -0.86
VPS13Q07878 tL(UAA)B2tL(UAA)B2 84 nt9.65□□□□□ -0.86
VPS13Q07878 tL(UAA)DtL(UAA)D 84 nt9.65□□□□□ -0.86
VPS13Q07878 SUP51tL(UAA)J 84 nt9.65□□□□□ -0.86
VPS13Q07878 tL(UAA)KtL(UAA)K 84 nt9.65□□□□□ -0.86
VPS13Q07878 tL(UAA)LtL(UAA)L 84 nt9.65□□□□□ -0.86
VPS13Q07878 tL(UAA)NtL(UAA)N 84 nt9.65□□□□□ -0.86
VPS13Q07878 MOB1YIL106W 945 nt9.65□□□□□ -0.86
VPS13Q07878 FCY1YPR062W 477 nt9.65□□□□□ -0.86
VPS13Q07878 COS10YNR075W 1125 nt9.64□□□□□ -0.87
VPS13Q07878 PHB2YGR231C 933 nt9.64□□□□□ -0.87
VPS13Q07878 RPT5YOR117W 1305 nt9.63□□□□□ -0.87
VPS13Q07878 BNI5YNL166C 1347 nt9.62□□□□□ -0.87
VPS13Q07878 MSC1YML128C 1542 nt9.61□□□□□ -0.87
VPS13Q07878 EMC3YKL207W 762 nt9.6□□□□□ -0.87
VPS13Q07878 RSC8YFR037C 1674 nt9.6□□□□□ -0.87
VPS13Q07878 IRC24YIR036C 792 nt9.59□□□□□ -0.87
VPS13Q07878 YCL074WYCL074W 927 nt9.58□□□□□ -0.88
VPS13Q07878 YGR259CYGR259C 441 nt9.57□□□□□ -0.88
VPS13Q07878 ELP4YPL101W 1371 nt9.56□□□□□ -0.88
VPS13Q07878 DDI1YER143W 1287 nt9.56□□□□□ -0.88
VPS13Q07878 YMR103CYMR103C 363 nt9.56□□□□□ -0.88
VPS13Q07878 THP3YPR045C 1413 nt9.55□□□□□ -0.88
VPS13Q07878 RAS2YNL098C 969 nt9.55□□□□□ -0.88
VPS13Q07878 HTS1YPR033C 1641 nt9.55□□□□□ -0.88
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms