Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ccl21aP84444 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccl21aP84444 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ccl21aP84444 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.43■■□□□ 1.02
Ccl21aP84444 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ccl21aP84444 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.41■■□□□ 1.02
Ccl21aP84444 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl21aP84444 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl21aP84444 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccl21aP84444 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Ccl21aP84444 Gm11175-201ENSMUST00000116172 543 ntBASIC21.39■■□□□ 1.01
Ccl21aP84444 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.39■■□□□ 1.01
Ccl21aP84444 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccl21aP84444 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Ccl21aP84444 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccl21aP84444 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccl21aP84444 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccl21aP84444 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccl21aP84444 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl21aP84444 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccl21aP84444 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ccl21aP84444 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl21aP84444 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Ccl21aP84444 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.32■■□□□ 1
Ccl21aP84444 Cap2-205ENSMUST00000225824 1634 ntBASIC21.32■■□□□ 1
Ccl21aP84444 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Ccl21aP84444 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ccl21aP84444 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.31■■□□□ 1
Ccl21aP84444 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl21aP84444 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ccl21aP84444 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl21aP84444 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl21aP84444 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.28■■□□□ 1
Ccl21aP84444 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl21aP84444 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ccl21aP84444 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ccl21aP84444 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccl21aP84444 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.27■■□□□ 1
Ccl21aP84444 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccl21aP84444 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccl21aP84444 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccl21aP84444 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccl21aP84444 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccl21aP84444 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.25■□□□□ 0.99
Ccl21aP84444 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl21aP84444 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl21aP84444 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.24■□□□□ 0.99
Ccl21aP84444 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccl21aP84444 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccl21aP84444 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Ccl21aP84444 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccl21aP84444 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl21aP84444 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl21aP84444 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccl21aP84444 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccl21aP84444 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccl21aP84444 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccl21aP84444 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccl21aP84444 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
Ccl21aP84444 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.19■□□□□ 0.98
Ccl21aP84444 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccl21aP84444 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccl21aP84444 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ccl21aP84444 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccl21aP84444 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Ccl21aP84444 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccl21aP84444 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccl21aP84444 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl21aP84444 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl21aP84444 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccl21aP84444 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl21aP84444 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl21aP84444 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl21aP84444 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.11■□□□□ 0.97
Ccl21aP84444 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ccl21aP84444 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.11■□□□□ 0.97
Ccl21aP84444 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.1■□□□□ 0.97
Ccl21aP84444 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ccl21aP84444 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ccl21aP84444 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccl21aP84444 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.09■□□□□ 0.97
Ccl21aP84444 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl21aP84444 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccl21aP84444 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.08■□□□□ 0.97
Ccl21aP84444 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccl21aP84444 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccl21aP84444 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccl21aP84444 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl21aP84444 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.04■□□□□ 0.96
Ccl21aP84444 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl21aP84444 Gm6311-201ENSMUST00000073790 878 ntBASIC21.04■□□□□ 0.96
Ccl21aP84444 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl21aP84444 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl21aP84444 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ccl21aP84444 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Ccl21aP84444 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ccl21aP84444 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ccl21aP84444 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Ccl21aP84444 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.02■□□□□ 0.96
Ccl21aP84444 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.02■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms