Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Lrch1P62046 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Lrch1P62046 Gm11599-201ENSMUST00000118720 878 ntBASIC30.28■■■□□ 2.44
Lrch1P62046 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.27■■■□□ 2.44
Lrch1P62046 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Lrch1P62046 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Lrch1P62046 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Lrch1P62046 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
Lrch1P62046 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Lrch1P62046 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Lrch1P62046 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Lrch1P62046 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
Lrch1P62046 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Lrch1P62046 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30.21■■■□□ 2.43
Lrch1P62046 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Lrch1P62046 Mir6538-201ENSMUST00000183713 110 ntBASIC30.2■■■□□ 2.43
Lrch1P62046 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.2■■■□□ 2.43
Lrch1P62046 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Lrch1P62046 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Lrch1P62046 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Lrch1P62046 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.19■■■□□ 2.42
Lrch1P62046 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Lrch1P62046 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Lrch1P62046 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Lrch1P62046 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Lrch1P62046 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Lrch1P62046 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Lrch1P62046 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
Lrch1P62046 Gm11175-201ENSMUST00000116172 543 ntBASIC30.12■■■□□ 2.41
Lrch1P62046 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Lrch1P62046 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Lrch1P62046 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Lrch1P62046 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Lrch1P62046 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.1■■■□□ 2.41
Lrch1P62046 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.1■■■□□ 2.41
Lrch1P62046 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Lrch1P62046 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Lrch1P62046 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Lrch1P62046 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Lrch1P62046 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Lrch1P62046 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Lrch1P62046 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Lrch1P62046 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Lrch1P62046 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Lrch1P62046 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Lrch1P62046 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Lrch1P62046 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Lrch1P62046 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Lrch1P62046 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.02■■■□□ 2.4
Lrch1P62046 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lrch1P62046 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.01■■■□□ 2.39
Lrch1P62046 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lrch1P62046 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30■■■□□ 2.39
Lrch1P62046 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Lrch1P62046 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
Lrch1P62046 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
Lrch1P62046 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Lrch1P62046 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.96■■■□□ 2.39
Lrch1P62046 Cap2-205ENSMUST00000225824 1634 ntBASIC29.96■■■□□ 2.39
Lrch1P62046 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Lrch1P62046 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
Lrch1P62046 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.94■■■□□ 2.38
Lrch1P62046 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.92■■■□□ 2.38
Lrch1P62046 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC29.92■■■□□ 2.38
Lrch1P62046 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Lrch1P62046 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Lrch1P62046 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.91■■■□□ 2.38
Lrch1P62046 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Lrch1P62046 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Lrch1P62046 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
Lrch1P62046 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Lrch1P62046 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
Lrch1P62046 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.88■■■□□ 2.37
Lrch1P62046 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.87■■■□□ 2.37
Lrch1P62046 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.86■■■□□ 2.37
Lrch1P62046 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.86■■■□□ 2.37
Lrch1P62046 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Lrch1P62046 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
Lrch1P62046 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Lrch1P62046 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Lrch1P62046 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Lrch1P62046 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Lrch1P62046 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.8■■■□□ 2.36
Lrch1P62046 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Lrch1P62046 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.78■■■□□ 2.36
Lrch1P62046 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Lrch1P62046 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Lrch1P62046 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Lrch1P62046 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.76■■■□□ 2.35
Lrch1P62046 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.76■■■□□ 2.35
Lrch1P62046 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
Lrch1P62046 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
Lrch1P62046 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Lrch1P62046 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Lrch1P62046 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Lrch1P62046 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Lrch1P62046 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC29.71■■■□□ 2.35
Lrch1P62046 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Lrch1P62046 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.71■■■□□ 2.35
Lrch1P62046 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms