Protein–RNA interactions for Protein: A0A1L1SQU7

Fat1, FAT atypical cadherin 1, mousemouse

Predictions only

Length 4,645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fat1A0A1L1SQU7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Fat1A0A1L1SQU7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Fat1A0A1L1SQU7 Cap2-205ENSMUST00000225824 1634 ntBASIC16.11■□□□□ 0.17
Fat1A0A1L1SQU7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fat1A0A1L1SQU7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Fat1A0A1L1SQU7 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Fat1A0A1L1SQU7 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.1■□□□□ 0.17
Fat1A0A1L1SQU7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Fat1A0A1L1SQU7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Fat1A0A1L1SQU7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Fat1A0A1L1SQU7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Fat1A0A1L1SQU7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Fat1A0A1L1SQU7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Fat1A0A1L1SQU7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fat1A0A1L1SQU7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fat1A0A1L1SQU7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fat1A0A1L1SQU7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Fat1A0A1L1SQU7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Fat1A0A1L1SQU7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fat1A0A1L1SQU7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Fat1A0A1L1SQU7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Fat1A0A1L1SQU7 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fat1A0A1L1SQU7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Fat1A0A1L1SQU7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fat1A0A1L1SQU7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Fat1A0A1L1SQU7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Fat1A0A1L1SQU7 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Fat1A0A1L1SQU7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.04■□□□□ 0.16
Fat1A0A1L1SQU7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Fat1A0A1L1SQU7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Fat1A0A1L1SQU7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Fat1A0A1L1SQU7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fat1A0A1L1SQU7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Fat1A0A1L1SQU7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Fat1A0A1L1SQU7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Fat1A0A1L1SQU7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Fat1A0A1L1SQU7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Fat1A0A1L1SQU7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Fat1A0A1L1SQU7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Fat1A0A1L1SQU7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.01■□□□□ 0.15
Fat1A0A1L1SQU7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.01■□□□□ 0.15
Fat1A0A1L1SQU7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.01■□□□□ 0.15
Fat1A0A1L1SQU7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fat1A0A1L1SQU7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fat1A0A1L1SQU7 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Fat1A0A1L1SQU7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
Fat1A0A1L1SQU7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Fat1A0A1L1SQU7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.98■□□□□ 0.15
Fat1A0A1L1SQU7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Fat1A0A1L1SQU7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC15.97■□□□□ 0.15
Fat1A0A1L1SQU7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.97■□□□□ 0.15
Fat1A0A1L1SQU7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Fat1A0A1L1SQU7 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Fat1A0A1L1SQU7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Fat1A0A1L1SQU7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fat1A0A1L1SQU7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fat1A0A1L1SQU7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Fat1A0A1L1SQU7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.95■□□□□ 0.14
Fat1A0A1L1SQU7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.95■□□□□ 0.14
Fat1A0A1L1SQU7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Fat1A0A1L1SQU7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
Fat1A0A1L1SQU7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC15.94■□□□□ 0.14
Fat1A0A1L1SQU7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.93■□□□□ 0.14
Fat1A0A1L1SQU7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Fat1A0A1L1SQU7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fat1A0A1L1SQU7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fat1A0A1L1SQU7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Fat1A0A1L1SQU7 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Fat1A0A1L1SQU7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC15.88■□□□□ 0.13
Fat1A0A1L1SQU7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.88■□□□□ 0.13
Fat1A0A1L1SQU7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Fat1A0A1L1SQU7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Fat1A0A1L1SQU7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fat1A0A1L1SQU7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fat1A0A1L1SQU7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fat1A0A1L1SQU7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Fat1A0A1L1SQU7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fat1A0A1L1SQU7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Fat1A0A1L1SQU7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.87■□□□□ 0.13
Fat1A0A1L1SQU7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fat1A0A1L1SQU7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Fat1A0A1L1SQU7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.86■□□□□ 0.13
Fat1A0A1L1SQU7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Fat1A0A1L1SQU7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Fat1A0A1L1SQU7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Fat1A0A1L1SQU7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Fat1A0A1L1SQU7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Fat1A0A1L1SQU7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Fat1A0A1L1SQU7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.83■□□□□ 0.13
Fat1A0A1L1SQU7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.83■□□□□ 0.13
Fat1A0A1L1SQU7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.83■□□□□ 0.13
Fat1A0A1L1SQU7 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fat1A0A1L1SQU7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Fat1A0A1L1SQU7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC15.83■□□□□ 0.12
Fat1A0A1L1SQU7 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Fat1A0A1L1SQU7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Fat1A0A1L1SQU7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Fat1A0A1L1SQU7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Fat1A0A1L1SQU7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Fat1A0A1L1SQU7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms