Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav7-5A0A0G2JFX6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trav7-5A0A0G2JFX6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav7-5A0A0G2JFX6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trav7-5A0A0G2JFX6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav7-5A0A0G2JFX6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Trav7-5A0A0G2JFX6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav7-5A0A0G2JFX6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.31■□□□□ 0.68
Trav7-5A0A0G2JFX6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trav7-5A0A0G2JFX6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Trav7-5A0A0G2JFX6 Gm24970-201ENSMUST00000175582 82 ntBASIC19.3■□□□□ 0.68
Trav7-5A0A0G2JFX6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav7-5A0A0G2JFX6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav7-5A0A0G2JFX6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav7-5A0A0G2JFX6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-5A0A0G2JFX6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-5A0A0G2JFX6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.28■□□□□ 0.68
Trav7-5A0A0G2JFX6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-5A0A0G2JFX6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-5A0A0G2JFX6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-5A0A0G2JFX6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.27■□□□□ 0.68
Trav7-5A0A0G2JFX6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.27■□□□□ 0.68
Trav7-5A0A0G2JFX6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.26■□□□□ 0.67
Trav7-5A0A0G2JFX6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Trav7-5A0A0G2JFX6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav7-5A0A0G2JFX6 Zxda-201ENSMUST00000117281 2621 ntBASIC19.25■□□□□ 0.67
Trav7-5A0A0G2JFX6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav7-5A0A0G2JFX6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav7-5A0A0G2JFX6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav7-5A0A0G2JFX6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.24■□□□□ 0.67
Trav7-5A0A0G2JFX6 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.22■□□□□ 0.67
Trav7-5A0A0G2JFX6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7-5A0A0G2JFX6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7-5A0A0G2JFX6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7-5A0A0G2JFX6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7-5A0A0G2JFX6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav7-5A0A0G2JFX6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav7-5A0A0G2JFX6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav7-5A0A0G2JFX6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7-5A0A0G2JFX6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7-5A0A0G2JFX6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7-5A0A0G2JFX6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7-5A0A0G2JFX6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7-5A0A0G2JFX6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7-5A0A0G2JFX6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7-5A0A0G2JFX6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Trav7-5A0A0G2JFX6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7-5A0A0G2JFX6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav7-5A0A0G2JFX6 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.15■□□□□ 0.66
Trav7-5A0A0G2JFX6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7-5A0A0G2JFX6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Trav7-5A0A0G2JFX6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7-5A0A0G2JFX6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trav7-5A0A0G2JFX6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav7-5A0A0G2JFX6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
Trav7-5A0A0G2JFX6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Trav7-5A0A0G2JFX6 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Trav7-5A0A0G2JFX6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trav7-5A0A0G2JFX6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trav7-5A0A0G2JFX6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav7-5A0A0G2JFX6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7-5A0A0G2JFX6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7-5A0A0G2JFX6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Trav7-5A0A0G2JFX6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7-5A0A0G2JFX6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7-5A0A0G2JFX6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7-5A0A0G2JFX6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7-5A0A0G2JFX6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.11■□□□□ 0.65
Trav7-5A0A0G2JFX6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav7-5A0A0G2JFX6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7-5A0A0G2JFX6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav7-5A0A0G2JFX6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav7-5A0A0G2JFX6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.07■□□□□ 0.64
Trav7-5A0A0G2JFX6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav7-5A0A0G2JFX6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trav7-5A0A0G2JFX6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav7-5A0A0G2JFX6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav7-5A0A0G2JFX6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav7-5A0A0G2JFX6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav7-5A0A0G2JFX6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7-5A0A0G2JFX6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7-5A0A0G2JFX6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7-5A0A0G2JFX6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav7-5A0A0G2JFX6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav7-5A0A0G2JFX6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.04■□□□□ 0.64
Trav7-5A0A0G2JFX6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7-5A0A0G2JFX6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7-5A0A0G2JFX6 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.03■□□□□ 0.64
Trav7-5A0A0G2JFX6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.01■□□□□ 0.63
Trav7-5A0A0G2JFX6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav7-5A0A0G2JFX6 Gm9905-201ENSMUST00000065740 1845 ntBASIC19■□□□□ 0.63
Trav7-5A0A0G2JFX6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Trav7-5A0A0G2JFX6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19■□□□□ 0.63
Trav7-5A0A0G2JFX6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-5A0A0G2JFX6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-5A0A0G2JFX6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav7-5A0A0G2JFX6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav7-5A0A0G2JFX6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav7-5A0A0G2JFX6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.97■□□□□ 0.63
Trav7-5A0A0G2JFX6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms