Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-59A0A0A6YXE0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.5■□□□□ 0.39
Ighv1-59A0A0A6YXE0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.5■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Zxda-201ENSMUST00000117281 2621 ntBASIC17.49■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Gm9397-201ENSMUST00000200125 605 ntBASIC17.48■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-59A0A0A6YXE0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-59A0A0A6YXE0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Gm45855-201ENSMUST00000212546 880 ntBASIC17.46■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ighv1-59A0A0A6YXE0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-59A0A0A6YXE0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.44■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-59A0A0A6YXE0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.43■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.4■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.4■□□□□ 0.38
Ighv1-59A0A0A6YXE0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-59A0A0A6YXE0 Gm24970-201ENSMUST00000175582 82 ntBASIC17.39■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.39■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.37■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.36■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-59A0A0A6YXE0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.35■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-59A0A0A6YXE0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-59A0A0A6YXE0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.32■□□□□ 0.36
Ighv1-59A0A0A6YXE0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Ighv1-59A0A0A6YXE0 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.32■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.29■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.29■□□□□ 0.36
Ighv1-59A0A0A6YXE0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.28■□□□□ 0.36
Ighv1-59A0A0A6YXE0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.28■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.28■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv1-59A0A0A6YXE0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv1-59A0A0A6YXE0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-59A0A0A6YXE0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.24■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv1-59A0A0A6YXE0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-59A0A0A6YXE0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.19■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 107.2 ms