Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-52A0A0A6YXC3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.91■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Gm45855-201ENSMUST00000212546 880 ntBASIC18.9■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ighv1-52A0A0A6YXC3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ighv1-52A0A0A6YXC3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-52A0A0A6YXC3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.87■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Zxda-201ENSMUST00000117281 2621 ntBASIC18.86■□□□□ 0.61
Ighv1-52A0A0A6YXC3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.86■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.84■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-52A0A0A6YXC3 Gm24970-201ENSMUST00000175582 82 ntBASIC18.83■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.83■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.82■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-52A0A0A6YXC3 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.81■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-52A0A0A6YXC3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.78■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-52A0A0A6YXC3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-52A0A0A6YXC3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ighv1-52A0A0A6YXC3 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.74■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-52A0A0A6YXC3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.73■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.72■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.72■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv1-52A0A0A6YXC3 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Ighv1-52A0A0A6YXC3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.69■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.69■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.69■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.68■□□□□ 0.58
Ighv1-52A0A0A6YXC3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC18.67■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv1-52A0A0A6YXC3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.65■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-52A0A0A6YXC3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.64■□□□□ 0.57
Ighv1-52A0A0A6YXC3 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.62■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.62■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC18.61■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-52A0A0A6YXC3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.59■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-52A0A0A6YXC3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-52A0A0A6YXC3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.58■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms