Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 YLL066W-AYLL066W-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YLL067W-AYLL067W-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YLR466C-AYLR466C-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YLR467C-AYLR467C-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YPT7YML001W 627 nt5.03□□□□□ -1.6
MSH3P25336 YML133W-BYML133W-B 483 nt5.03□□□□□ -1.6
MSH3P25336 YNL339W-BYNL339W-B 483 nt5.03□□□□□ -1.6
MSH3P25336 YNR042WYNR042W 429 nt5.03□□□□□ -1.6
MSH3P25336 YBL113W-AYBL113W-A 483 nt5.03□□□□□ -1.6
MSH3P25336 RBL2YOR265W 321 nt5.03□□□□□ -1.6
MSH3P25336 YOR396C-AYOR396C-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YPL283W-BYPL283W-B 483 nt5.03□□□□□ -1.6
MSH3P25336 OPY2YPR075C 1083 nt5.03□□□□□ -1.6
MSH3P25336 SUA7YPR086W 1038 nt5.03□□□□□ -1.6
MSH3P25336 YPR204C-AYPR204C-A 483 nt5.03□□□□□ -1.6
MSH3P25336 YBR090CYBR090C 369 nt5.03□□□□□ -1.6
MSH3P25336 YOR365CYOR365C 2112 nt5.03□□□□□ -1.6
MSH3P25336 ALD3YMR169C 1521 nt5.02□□□□□ -1.61
MSH3P25336 ALD2YMR170C 1521 nt5.02□□□□□ -1.61
MSH3P25336 AKL1YBR059C 3327 nt5.02□□□□□ -1.61
MSH3P25336 YDR170W-AYDR170W-A 1323 nt5.02□□□□□ -1.61
MSH3P25336 YMR046CYMR046C 1323 nt5.02□□□□□ -1.61
MSH3P25336 TYW1YPL207W 2433 nt5.02□□□□□ -1.61
MSH3P25336 CLB3YDL155W 1284 nt5.02□□□□□ -1.61
MSH3P25336 RCR2YDR003W 633 nt5.02□□□□□ -1.61
MSH3P25336 YDR355CYDR355C 303 nt5.02□□□□□ -1.61
MSH3P25336 RIP1YEL024W 648 nt5.02□□□□□ -1.61
MSH3P25336 PRE9YGR135W 777 nt5.02□□□□□ -1.61
MSH3P25336 VPS29YHR012W 849 nt5.02□□□□□ -1.61
MSH3P25336 DSE2YHR143W 978 nt5.02□□□□□ -1.61
MSH3P25336 SAP30YMR263W 606 nt5.02□□□□□ -1.61
MSH3P25336 YBL055CYBL055C 1257 nt5.02□□□□□ -1.61
MSH3P25336 YOL159C-AYOL159C-A 273 nt5.02□□□□□ -1.61
MSH3P25336 YOR029WYOR029W 336 nt5.02□□□□□ -1.61
MSH3P25336 FMP30YPL103C 1407 nt5.02□□□□□ -1.61
MSH3P25336 UBX5YDR330W 1503 nt5.02□□□□□ -1.61
MSH3P25336 RRN7YJL025W 1545 nt5.02□□□□□ -1.61
MSH3P25336 UPC2YDR213W 2742 nt5.01□□□□□ -1.61
MSH3P25336 ARG82YDR173C 1068 nt5.01□□□□□ -1.61
MSH3P25336 YAP5YIR018W 738 nt5.01□□□□□ -1.61
MSH3P25336 YJR012CYJR012C 624 nt5.01□□□□□ -1.61
MSH3P25336 YMR052C-AYMR052C-A 366 nt5.01□□□□□ -1.61
MSH3P25336 OCA2YNL056W 594 nt5.01□□□□□ -1.61
MSH3P25336 YPL034WYPL034W 498 nt5.01□□□□□ -1.61
MSH3P25336 LEE1YPL054W 906 nt5.01□□□□□ -1.61
MSH3P25336 YPL119C-AYPL119C-A 264 nt5.01□□□□□ -1.61
MSH3P25336 THR4YCR053W 1545 nt5.01□□□□□ -1.61
MSH3P25336 YER158CYER158C 1722 nt5□□□□□ -1.61
MSH3P25336 AVT1YJR001W 1809 nt5□□□□□ -1.61
MSH3P25336 SWI3YJL176C 2478 nt5□□□□□ -1.61
MSH3P25336 YCL075WYCL075W 441 nt5□□□□□ -1.61
MSH3P25336 MGT1YDL200C 567 nt5□□□□□ -1.61
MSH3P25336 ECM11YDR446W 909 nt5□□□□□ -1.61
MSH3P25336 SNA2YDR525W-A 240 nt5□□□□□ -1.61
MSH3P25336 YAL026C-AYAL026C-A 438 nt5□□□□□ -1.61
MSH3P25336 YAL047W-AYAL047W-A 330 nt5□□□□□ -1.61
MSH3P25336 IMP1YMR150C 573 nt5□□□□□ -1.61
MSH3P25336 RHO5YNL180C 996 nt5□□□□□ -1.61
MSH3P25336 FEX1YOR390W 1128 nt5□□□□□ -1.61
MSH3P25336 YPL077CYPL077C 723 nt5□□□□□ -1.61
MSH3P25336 FEX2YPL279C 1128 nt5□□□□□ -1.61
MSH3P25336 SEN1YLR430W 6696 nt5□□□□□ -1.61
MSH3P25336 PIG2YIL045W 1617 nt5□□□□□ -1.61
MSH3P25336 AEP3YPL005W 1821 nt5□□□□□ -1.61
MSH3P25336 HOM3YER052C 1584 nt4.99□□□□□ -1.61
MSH3P25336 YDR261C-DYDR261C-D 4815 nt4.99□□□□□ -1.61
MSH3P25336 CDC9YDL164C 2268 nt4.99□□□□□ -1.61
MSH3P25336 TOG1YER184C 2385 nt4.99□□□□□ -1.61
MSH3P25336 ALE1YOR175C 1860 nt4.99□□□□□ -1.61
MSH3P25336 RPC11YDR045C 333 nt4.99□□□□□ -1.61
MSH3P25336 MET32YDR253C 576 nt4.99□□□□□ -1.61
MSH3P25336 FUR1YHR128W 651 nt4.99□□□□□ -1.61
MSH3P25336 FMC1YIL098C 468 nt4.99□□□□□ -1.61
MSH3P25336 RPL16AYIL133C 600 nt4.99□□□□□ -1.61
MSH3P25336 YML003WYML003W 873 nt4.99□□□□□ -1.61
MSH3P25336 MRPL39YML009C 213 nt4.99□□□□□ -1.61
MSH3P25336 RRN9YMR270C 1098 nt4.99□□□□□ -1.61
MSH3P25336 YOR105WYOR105W 327 nt4.99□□□□□ -1.61
MSH3P25336 YRO2YBR054W 1035 nt4.99□□□□□ -1.61
MSH3P25336 YBR103C-AYBR103C-A 144 nt4.99□□□□□ -1.61
MSH3P25336 PAH1YMR165C 2589 nt4.99□□□□□ -1.61
MSH3P25336 RAD1YPL022W 3303 nt4.98□□□□□ -1.61
MSH3P25336 RSC58YLR033W 1509 nt4.98□□□□□ -1.61
MSH3P25336 YDL163WYDL163W 303 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)CtK(CUU)C 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)D1tK(CUU)D1 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)D2tK(CUU)D2 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)E1tK(CUU)E1 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)E2tK(CUU)E2 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)FtK(CUU)F 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)G1tK(CUU)G1 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)G2tK(CUU)G2 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)G3tK(CUU)G3 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)ItK(CUU)I 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)JtK(CUU)J 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)KtK(CUU)K 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)MtK(CUU)M 73 nt4.98□□□□□ -1.61
MSH3P25336 tK(CUU)PtK(CUU)P 73 nt4.98□□□□□ -1.61
MSH3P25336 JAC1YGL018C 555 nt4.98□□□□□ -1.61
MSH3P25336 QCR10YHR001W-A 234 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 50.8 ms