Protein–RNA interactions for Protein: Q8R526

Pkd1l1, Polycystic kidney disease protein 1-like 1, mousemouse

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l1Q8R526 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1l1Q8R526 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.09■□□□□ 0.65
Pkd1l1Q8R526 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pkd1l1Q8R526 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.07■□□□□ 0.64
Pkd1l1Q8R526 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.06■□□□□ 0.64
Pkd1l1Q8R526 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pkd1l1Q8R526 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pkd1l1Q8R526 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pkd1l1Q8R526 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pkd1l1Q8R526 Gm11599-201ENSMUST00000118720 878 ntBASIC18.97■□□□□ 0.63
Pkd1l1Q8R526 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pkd1l1Q8R526 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.96■□□□□ 0.63
Pkd1l1Q8R526 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pkd1l1Q8R526 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pkd1l1Q8R526 Mipep-204ENSMUST00000225043 1548 ntBASIC18.94■□□□□ 0.62
Pkd1l1Q8R526 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1l1Q8R526 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pkd1l1Q8R526 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l1Q8R526 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1l1Q8R526 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l1Q8R526 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pkd1l1Q8R526 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Pkd1l1Q8R526 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pkd1l1Q8R526 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pkd1l1Q8R526 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.89■□□□□ 0.61
Pkd1l1Q8R526 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pkd1l1Q8R526 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pkd1l1Q8R526 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l1Q8R526 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkd1l1Q8R526 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l1Q8R526 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l1Q8R526 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pkd1l1Q8R526 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l1Q8R526 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pkd1l1Q8R526 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l1Q8R526 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1l1Q8R526 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkd1l1Q8R526 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pkd1l1Q8R526 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pkd1l1Q8R526 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pkd1l1Q8R526 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pkd1l1Q8R526 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.79■□□□□ 0.6
Pkd1l1Q8R526 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pkd1l1Q8R526 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pkd1l1Q8R526 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.78■□□□□ 0.6
Pkd1l1Q8R526 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Gm22567-201ENSMUST00000175542 342 ntBASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pkd1l1Q8R526 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pkd1l1Q8R526 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.76■□□□□ 0.59
Pkd1l1Q8R526 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pkd1l1Q8R526 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.73■□□□□ 0.59
Pkd1l1Q8R526 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pkd1l1Q8R526 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pkd1l1Q8R526 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pkd1l1Q8R526 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.69■□□□□ 0.58
Pkd1l1Q8R526 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Pkd1l1Q8R526 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd1l1Q8R526 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd1l1Q8R526 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l1Q8R526 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd1l1Q8R526 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l1Q8R526 Nkain2-201ENSMUST00000092602 558 ntBASIC18.65■□□□□ 0.58
Pkd1l1Q8R526 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd1l1Q8R526 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd1l1Q8R526 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd1l1Q8R526 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pkd1l1Q8R526 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.63■□□□□ 0.57
Pkd1l1Q8R526 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pkd1l1Q8R526 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pkd1l1Q8R526 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pkd1l1Q8R526 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pkd1l1Q8R526 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms