Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC42.23■■■■■ 4.35
Pabpn1Q8CCS6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC42.23■■■■■ 4.35
Pabpn1Q8CCS6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC42.22■■■■■ 4.35
Pabpn1Q8CCS6 Gm7432-201ENSMUST00000210343 879 ntBASIC42.2■■■■■ 4.35
Pabpn1Q8CCS6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC42.2■■■■■ 4.35
Pabpn1Q8CCS6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC42.19■■■■■ 4.34
Pabpn1Q8CCS6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC42.19■■■■■ 4.34
Pabpn1Q8CCS6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC42.18■■■■■ 4.34
Pabpn1Q8CCS6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC42.17■■■■■ 4.34
Pabpn1Q8CCS6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC42.16■■■■■ 4.34
Pabpn1Q8CCS6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC42.13■■■■■ 4.34
Pabpn1Q8CCS6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC42.13■■■■■ 4.33
Pabpn1Q8CCS6 Gm43863-201ENSMUST00000203822 1192 ntBASIC42.12■■■■■ 4.33
Pabpn1Q8CCS6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC42.11■■■■■ 4.33
Pabpn1Q8CCS6 Cap2-205ENSMUST00000225824 1634 ntBASIC42.1■■■■■ 4.33
Pabpn1Q8CCS6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC42.1■■■■■ 4.33
Pabpn1Q8CCS6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC42.09■■■■■ 4.33
Pabpn1Q8CCS6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC42.09■■■■■ 4.33
Pabpn1Q8CCS6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC42.08■■■■■ 4.33
Pabpn1Q8CCS6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC42.07■■■■■ 4.33
Pabpn1Q8CCS6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC42.07■■■■■ 4.33
Pabpn1Q8CCS6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC42.05■■■■■ 4.32
Pabpn1Q8CCS6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC42.03■■■■■ 4.32
Pabpn1Q8CCS6 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC42.02■■■■■ 4.32
Pabpn1Q8CCS6 Gm11175-201ENSMUST00000116172 543 ntBASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC42.01■■■■■ 4.32
Pabpn1Q8CCS6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC42■■■■■ 4.31
Pabpn1Q8CCS6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC41.99■■■■■ 4.31
Pabpn1Q8CCS6 Gm15039-201ENSMUST00000118914 875 ntBASIC41.99■■■■■ 4.31
Pabpn1Q8CCS6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC41.95■■■■■ 4.31
Pabpn1Q8CCS6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC41.95■■■■■ 4.31
Pabpn1Q8CCS6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC41.94■■■■■ 4.3
Pabpn1Q8CCS6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
Pabpn1Q8CCS6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC41.93■■■■■ 4.3
Pabpn1Q8CCS6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC41.92■■■■■ 4.3
Pabpn1Q8CCS6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC41.88■■■■■ 4.29
Pabpn1Q8CCS6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC41.88■■■■■ 4.29
Pabpn1Q8CCS6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC41.86■■■■■ 4.29
Pabpn1Q8CCS6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
Pabpn1Q8CCS6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC41.82■■■■■ 4.29
Pabpn1Q8CCS6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC41.82■■■■■ 4.29
Pabpn1Q8CCS6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC41.8■■■■■ 4.28
Pabpn1Q8CCS6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC41.8■■■■■ 4.28
Pabpn1Q8CCS6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC41.77■■■■■ 4.28
Pabpn1Q8CCS6 Gm11599-201ENSMUST00000118720 878 ntBASIC41.76■■■■■ 4.28
Pabpn1Q8CCS6 Nkain2-201ENSMUST00000092602 558 ntBASIC41.75■■■■■ 4.27
Pabpn1Q8CCS6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC41.75■■■■■ 4.27
Pabpn1Q8CCS6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC41.74■■■■■ 4.27
Pabpn1Q8CCS6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.7■■■■■ 4.27
Pabpn1Q8CCS6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC41.7■■■■■ 4.27
Pabpn1Q8CCS6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.26
Pabpn1Q8CCS6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC41.66■■■■■ 4.26
Pabpn1Q8CCS6 AC157572.2-201ENSMUST00000226970 908 ntBASIC41.65■■■■■ 4.26
Pabpn1Q8CCS6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC41.63■■■■■ 4.25
Pabpn1Q8CCS6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC41.61■■■■■ 4.25
Pabpn1Q8CCS6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC41.61■■■■■ 4.25
Pabpn1Q8CCS6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC41.59■■■■■ 4.25
Pabpn1Q8CCS6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC41.56■■■■■ 4.24
Pabpn1Q8CCS6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
Pabpn1Q8CCS6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC41.53■■■■■ 4.24
Pabpn1Q8CCS6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
Pabpn1Q8CCS6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
Pabpn1Q8CCS6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC41.49■■■■■ 4.23
Pabpn1Q8CCS6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC41.47■■■■■ 4.23
Pabpn1Q8CCS6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC41.46■■■■■ 4.23
Pabpn1Q8CCS6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC41.45■■■■■ 4.23
Pabpn1Q8CCS6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
Pabpn1Q8CCS6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
Pabpn1Q8CCS6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC41.4■■■■■ 4.22
Pabpn1Q8CCS6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC41.38■■■■■ 4.22
Pabpn1Q8CCS6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC41.38■■■■■ 4.21
Pabpn1Q8CCS6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC41.38■■■■■ 4.21
Pabpn1Q8CCS6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
Pabpn1Q8CCS6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC41.36■■■■■ 4.21
Pabpn1Q8CCS6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC41.33■■■■■ 4.21
Pabpn1Q8CCS6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC41.31■■■■■ 4.2
Pabpn1Q8CCS6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
Pabpn1Q8CCS6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC41.28■■■■■ 4.2
Pabpn1Q8CCS6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC41.23■■■■■ 4.19
Pabpn1Q8CCS6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC41.19■■■■■ 4.18
Pabpn1Q8CCS6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC41.18■■■■■ 4.18
Pabpn1Q8CCS6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC41.18■■■■■ 4.18
Pabpn1Q8CCS6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC41.17■■■■■ 4.18
Pabpn1Q8CCS6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC41.17■■■■■ 4.18
Pabpn1Q8CCS6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC41.17■■■■■ 4.18
Pabpn1Q8CCS6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Pabpn1Q8CCS6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
Pabpn1Q8CCS6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC41.15■■■■■ 4.18
Pabpn1Q8CCS6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC41.15■■■■■ 4.18
Pabpn1Q8CCS6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC41.12■■■■■ 4.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms