Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 YLR179CYLR179C 606 nt9.28□□□□□ -0.92
TY1A-MR1Q04215 YLR235CYLR235C 399 nt9.28□□□□□ -0.92
TY1A-MR1Q04215 YHP1YDR451C 1062 nt9.27□□□□□ -0.93
TY1A-MR1Q04215 YIR016WYIR016W 798 nt9.27□□□□□ -0.93
TY1A-MR1Q04215 YJR154WYJR154W 1041 nt9.27□□□□□ -0.93
TY1A-MR1Q04215 YML079WYML079W 606 nt9.27□□□□□ -0.93
TY1A-MR1Q04215 PBP1YGR178C 2169 nt9.27□□□□□ -0.93
TY1A-MR1Q04215 VPS60YDR486C 690 nt9.26□□□□□ -0.93
TY1A-MR1Q04215 YMR306C-AYMR306C-A 390 nt9.26□□□□□ -0.93
TY1A-MR1Q04215 FTH1YBR207W 1398 nt9.25□□□□□ -0.93
TY1A-MR1Q04215 CYT2YKL087C 675 nt9.25□□□□□ -0.93
TY1A-MR1Q04215 UBC12YLR306W 567 nt9.25□□□□□ -0.93
TY1A-MR1Q04215 XDJ1YLR090W 1380 nt9.24□□□□□ -0.93
TY1A-MR1Q04215 YGR201CYGR201C 678 nt9.24□□□□□ -0.93
TY1A-MR1Q04215 MPC1YGL080W 393 nt9.23□□□□□ -0.93
TY1A-MR1Q04215 YGL118CYGL118C 438 nt9.23□□□□□ -0.93
TY1A-MR1Q04215 tR(UCU)Q1tR(UCU)Q1 73 nt9.23□□□□□ -0.93
TY1A-MR1Q04215 ARC19YKL013C 516 nt9.23□□□□□ -0.93
TY1A-MR1Q04215 CCT4YDL143W 1587 nt9.23□□□□□ -0.93
TY1A-MR1Q04215 PIC2YER053C 903 nt9.22□□□□□ -0.93
TY1A-MR1Q04215 COG1YGL223C 1254 nt9.22□□□□□ -0.93
TY1A-MR1Q04215 RDN18-1RDN18-1 1800 nt9.21□□□□□ -0.93
TY1A-MR1Q04215 RDN18-2RDN18-2 1800 nt9.21□□□□□ -0.93
TY1A-MR1Q04215 ALG3YBL082C 1377 nt9.21□□□□□ -0.94
TY1A-MR1Q04215 GTT3YEL017W 1014 nt9.2□□□□□ -0.94
TY1A-MR1Q04215 AHT1YHR093W 549 nt9.2□□□□□ -0.94
TY1A-MR1Q04215 MPS2YGL075C 1164 nt9.19□□□□□ -0.94
TY1A-MR1Q04215 SWC5YBR231C 912 nt9.19□□□□□ -0.94
TY1A-MR1Q04215 STR3YGL184C 1398 nt9.18□□□□□ -0.94
TY1A-MR1Q04215 YBL081WYBL081W 1107 nt9.18□□□□□ -0.94
TY1A-MR1Q04215 SPP1YPL138C 1062 nt9.18□□□□□ -0.94
TY1A-MR1Q04215 PAB1YER165W 1734 nt9.17□□□□□ -0.94
TY1A-MR1Q04215 FAR3YMR052W 615 nt9.16□□□□□ -0.94
TY1A-MR1Q04215 DUT1YBR252W 444 nt9.16□□□□□ -0.94
TY1A-MR1Q04215 ARP6YLR085C 1317 nt9.15□□□□□ -0.94
TY1A-MR1Q04215 BNS1YGR230W 414 nt9.15□□□□□ -0.94
TY1A-MR1Q04215 COX3Q0275 810 nt9.15□□□□□ -0.94
TY1A-MR1Q04215 MRPL36YBR122C 534 nt9.14□□□□□ -0.95
TY1A-MR1Q04215 BNA3YJL060W 1335 nt9.12□□□□□ -0.95
TY1A-MR1Q04215 RUF21RUF21 707 nt9.12□□□□□ -0.95
TY1A-MR1Q04215 YKL030WYKL030W 606 nt9.11□□□□□ -0.95
TY1A-MR1Q04215 VPS28YPL065W 729 nt9.11□□□□□ -0.95
TY1A-MR1Q04215 YPR064WYPR064W 420 nt9.11□□□□□ -0.95
TY1A-MR1Q04215 AIM41YOR215C 558 nt9.1□□□□□ -0.95
TY1A-MR1Q04215 NAT5YOR253W 531 nt9.1□□□□□ -0.95
TY1A-MR1Q04215 AQY2YLL052C 450 nt9.09□□□□□ -0.95
TY1A-MR1Q04215 YTH1YPR107C 627 nt9.09□□□□□ -0.95
TY1A-MR1Q04215 AVT6YER119C 1347 nt9.08□□□□□ -0.96
TY1A-MR1Q04215 RTN2YDL204W 1182 nt9.08□□□□□ -0.96
TY1A-MR1Q04215 YNL234WYNL234W 1281 nt9.08□□□□□ -0.96
TY1A-MR1Q04215 GOR1YNL274C 1053 nt9.08□□□□□ -0.96
TY1A-MR1Q04215 HOS2YGL194C 1359 nt9.07□□□□□ -0.96
TY1A-MR1Q04215 ICE2YIL090W 1476 nt9.05□□□□□ -0.96
TY1A-MR1Q04215 GDH3YAL062W 1374 nt9.05□□□□□ -0.96
TY1A-MR1Q04215 SED5YLR026C 1023 nt9.05□□□□□ -0.96
TY1A-MR1Q04215 YLR311CYLR311C 348 nt9.05□□□□□ -0.96
TY1A-MR1Q04215 CMP2YML057W 1815 nt9.04□□□□□ -0.96
TY1A-MR1Q04215 YPR1YDR368W 939 nt9.04□□□□□ -0.96
TY1A-MR1Q04215 REC114YMR133W 1287 nt9.04□□□□□ -0.96
TY1A-MR1Q04215 DIA1YMR316W 1011 nt9.04□□□□□ -0.96
TY1A-MR1Q04215 YDL157CYDL157C 357 nt9.03□□□□□ -0.96
TY1A-MR1Q04215 TAD3YLR316C 969 nt9.03□□□□□ -0.96
TY1A-MR1Q04215 TSR2YLR435W 618 nt9.03□□□□□ -0.96
TY1A-MR1Q04215 YAT1YAR035W 2064 nt9.01□□□□□ -0.97
TY1A-MR1Q04215 YNL040WYNL040W 1371 nt9.01□□□□□ -0.97
TY1A-MR1Q04215 APM1YPL259C 1428 nt9.01□□□□□ -0.97
TY1A-MR1Q04215 NEJ1YLR265C 1029 nt9□□□□□ -0.97
TY1A-MR1Q04215 NDJ1YOL104C 1059 nt8.98□□□□□ -0.97
TY1A-MR1Q04215 RPM1RPM1 483 nt8.97□□□□□ -0.97
TY1A-MR1Q04215 PEX34YCL056C 435 nt8.97□□□□□ -0.97
TY1A-MR1Q04215 BDH1YAL060W 1149 nt8.96□□□□□ -0.98
TY1A-MR1Q04215 SHM2YLR058C 1410 nt8.96□□□□□ -0.98
TY1A-MR1Q04215 SUA5YGL169W 1281 nt8.95□□□□□ -0.98
TY1A-MR1Q04215 YMR119W-AYMR119W-A 375 nt8.95□□□□□ -0.98
TY1A-MR1Q04215 YMR147WYMR147W 672 nt8.95□□□□□ -0.98
TY1A-MR1Q04215 NDI1YML120C 1542 nt8.95□□□□□ -0.98
TY1A-MR1Q04215 YLR415CYLR415C 339 nt8.94□□□□□ -0.98
TY1A-MR1Q04215 PCL10YGL134W 1302 nt8.94□□□□□ -0.98
TY1A-MR1Q04215 YHR054CYHR054C 1065 nt8.93□□□□□ -0.98
TY1A-MR1Q04215 DAT1YML113W 747 nt8.93□□□□□ -0.98
TY1A-MR1Q04215 TAZ1YPR140W 1146 nt8.93□□□□□ -0.98
TY1A-MR1Q04215 AME1YBR211C 975 nt8.93□□□□□ -0.98
TY1A-MR1Q04215 GET2YER083C 858 nt8.92□□□□□ -0.98
TY1A-MR1Q04215 YGR011WYGR011W 327 nt8.92□□□□□ -0.98
TY1A-MR1Q04215 RSA3YLR221C 663 nt8.92□□□□□ -0.98
TY1A-MR1Q04215 TIM17YJL143W 477 nt8.9□□□□□ -0.98
TY1A-MR1Q04215 ATG17YLR423C 1254 nt8.9□□□□□ -0.98
TY1A-MR1Q04215 PLB1YMR008C 1995 nt8.9□□□□□ -0.99
TY1A-MR1Q04215 PUS5YLR165C 765 nt8.89□□□□□ -0.99
TY1A-MR1Q04215 YMR074CYMR074C 438 nt8.89□□□□□ -0.99
TY1A-MR1Q04215 SCO2YBR024W 906 nt8.89□□□□□ -0.99
TY1A-MR1Q04215 YDL158CYDL158C 309 nt8.88□□□□□ -0.99
TY1A-MR1Q04215 MRI1YPR118W 1236 nt8.88□□□□□ -0.99
TY1A-MR1Q04215 HSL7YBR133C 2484 nt8.88□□□□□ -0.99
TY1A-MR1Q04215 NBP35YGL091C 987 nt8.86□□□□□ -0.99
TY1A-MR1Q04215 NIT1YIL164C 600 nt8.86□□□□□ -0.99
TY1A-MR1Q04215 HIF1YLL022C 1158 nt8.86□□□□□ -0.99
TY1A-MR1Q04215 tL(GAG)GtL(GAG)G 82 nt8.85□□□□□ -0.99
TY1A-MR1Q04215 PRM5YIL117C 957 nt8.85□□□□□ -0.99
TY1A-MR1Q04215 TAF4YMR005W 1167 nt8.85□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms