Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.69■□□□□ 0.9
Fn1P11276 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Fn1P11276 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Fn1P11276 Gm11175-201ENSMUST00000116172 543 ntBASIC20.68■□□□□ 0.9
Fn1P11276 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Fn1P11276 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Fn1P11276 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.67■□□□□ 0.9
Fn1P11276 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.66■□□□□ 0.9
Fn1P11276 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fn1P11276 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Fn1P11276 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.64■□□□□ 0.89
Fn1P11276 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Fn1P11276 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Fn1P11276 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Fn1P11276 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Fn1P11276 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Fn1P11276 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.57■□□□□ 0.88
Fn1P11276 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Fn1P11276 Cap2-205ENSMUST00000225824 1634 ntBASIC20.56■□□□□ 0.88
Fn1P11276 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.56■□□□□ 0.88
Fn1P11276 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.56■□□□□ 0.88
Fn1P11276 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fn1P11276 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fn1P11276 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Fn1P11276 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Fn1P11276 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Fn1P11276 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Fn1P11276 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Fn1P11276 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fn1P11276 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fn1P11276 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Fn1P11276 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Fn1P11276 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.51■□□□□ 0.87
Fn1P11276 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Fn1P11276 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fn1P11276 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fn1P11276 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Fn1P11276 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Fn1P11276 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.49■□□□□ 0.87
Fn1P11276 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Fn1P11276 Gm11599-201ENSMUST00000118720 878 ntBASIC20.48■□□□□ 0.87
Fn1P11276 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Fn1P11276 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Fn1P11276 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Fn1P11276 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Fn1P11276 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Fn1P11276 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Fn1P11276 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Fn1P11276 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.41■□□□□ 0.86
Fn1P11276 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Fn1P11276 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fn1P11276 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.36■□□□□ 0.85
Fn1P11276 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Fn1P11276 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Fn1P11276 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fn1P11276 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Fn1P11276 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fn1P11276 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fn1P11276 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Fn1P11276 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Fn1P11276 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Fn1P11276 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Fn1P11276 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fn1P11276 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Fn1P11276 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.3■□□□□ 0.84
Fn1P11276 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.29■□□□□ 0.84
Fn1P11276 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fn1P11276 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Fn1P11276 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Fn1P11276 Nkain2-201ENSMUST00000092602 558 ntBASIC20.28■□□□□ 0.84
Fn1P11276 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fn1P11276 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Fn1P11276 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Fn1P11276 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fn1P11276 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Fn1P11276 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.25■□□□□ 0.83
Fn1P11276 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fn1P11276 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Fn1P11276 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fn1P11276 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Fn1P11276 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fn1P11276 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fn1P11276 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fn1P11276 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.18■□□□□ 0.82
Fn1P11276 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Fn1P11276 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fn1P11276 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fn1P11276 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.16■□□□□ 0.82
Fn1P11276 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.15■□□□□ 0.82
Fn1P11276 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.15■□□□□ 0.82
Fn1P11276 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Fn1P11276 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Fn1P11276 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms