Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf213E9Q555 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf213E9Q555 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rnf213E9Q555 Gm43863-201ENSMUST00000203822 1192 ntBASIC13.09□□□□□ -0.31
Rnf213E9Q555 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.31
Rnf213E9Q555 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf213E9Q555 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC13.07□□□□□ -0.32
Rnf213E9Q555 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf213E9Q555 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Rnf213E9Q555 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Rnf213E9Q555 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rnf213E9Q555 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Rnf213E9Q555 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
Rnf213E9Q555 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf213E9Q555 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf213E9Q555 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf213E9Q555 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf213E9Q555 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf213E9Q555 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC13.04□□□□□ -0.32
Rnf213E9Q555 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf213E9Q555 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf213E9Q555 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf213E9Q555 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf213E9Q555 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf213E9Q555 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf213E9Q555 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf213E9Q555 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rnf213E9Q555 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf213E9Q555 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf213E9Q555 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf213E9Q555 Gm7432-201ENSMUST00000210343 879 ntBASIC13□□□□□ -0.33
Rnf213E9Q555 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC12.99□□□□□ -0.33
Rnf213E9Q555 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rnf213E9Q555 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf213E9Q555 AC157572.2-201ENSMUST00000226970 908 ntBASIC12.97□□□□□ -0.33
Rnf213E9Q555 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC12.97□□□□□ -0.33
Rnf213E9Q555 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf213E9Q555 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rnf213E9Q555 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf213E9Q555 Cap2-205ENSMUST00000225824 1634 ntBASIC12.96□□□□□ -0.34
Rnf213E9Q555 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf213E9Q555 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rnf213E9Q555 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.92□□□□□ -0.34
Rnf213E9Q555 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf213E9Q555 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf213E9Q555 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC12.92□□□□□ -0.34
Rnf213E9Q555 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Rnf213E9Q555 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rnf213E9Q555 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf213E9Q555 Gm11599-201ENSMUST00000118720 878 ntBASIC12.9□□□□□ -0.34
Rnf213E9Q555 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf213E9Q555 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC12.9□□□□□ -0.35
Rnf213E9Q555 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf213E9Q555 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf213E9Q555 Nkain2-201ENSMUST00000092602 558 ntBASIC12.89□□□□□ -0.35
Rnf213E9Q555 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf213E9Q555 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf213E9Q555 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf213E9Q555 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Rnf213E9Q555 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf213E9Q555 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf213E9Q555 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf213E9Q555 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf213E9Q555 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC12.88□□□□□ -0.35
Rnf213E9Q555 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rnf213E9Q555 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC12.87□□□□□ -0.35
Rnf213E9Q555 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf213E9Q555 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf213E9Q555 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf213E9Q555 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rnf213E9Q555 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf213E9Q555 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf213E9Q555 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf213E9Q555 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf213E9Q555 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf213E9Q555 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf213E9Q555 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf213E9Q555 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf213E9Q555 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf213E9Q555 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf213E9Q555 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf213E9Q555 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rnf213E9Q555 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf213E9Q555 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf213E9Q555 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rnf213E9Q555 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC12.79□□□□□ -0.36
Rnf213E9Q555 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Rnf213E9Q555 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC12.79□□□□□ -0.36
Rnf213E9Q555 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rnf213E9Q555 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Rnf213E9Q555 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Rnf213E9Q555 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.76□□□□□ -0.37
Rnf213E9Q555 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Rnf213E9Q555 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rnf213E9Q555 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf213E9Q555 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf213E9Q555 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rnf213E9Q555 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC12.75□□□□□ -0.37
Rnf213E9Q555 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC12.75□□□□□ -0.37
Rnf213E9Q555 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms