Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.49■■□□□ 1.51
TPM3P06753 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPM3P06753 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPM3P06753 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPM3P06753 RARRES2P2-201ENST00000394842 485 ntBASIC24.49■■□□□ 1.51
TPM3P06753 AC120024.1-201ENST00000562672 995 ntBASIC24.49■■□□□ 1.51
TPM3P06753 U85056.1-201ENST00000616429 682 ntBASIC24.49■■□□□ 1.51
TPM3P06753 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPM3P06753 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.49■■□□□ 1.51
TPM3P06753 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
TPM3P06753 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
TPM3P06753 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TPM3P06753 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TPM3P06753 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TPM3P06753 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
TPM3P06753 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TPM3P06753 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
TPM3P06753 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.48■■□□□ 1.51
TPM3P06753 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TPM3P06753 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
TPM3P06753 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TPM3P06753 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
TPM3P06753 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.47■■□□□ 1.51
TPM3P06753 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC24.47■■□□□ 1.51
TPM3P06753 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TPM3P06753 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.47■■□□□ 1.51
TPM3P06753 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.47■■□□□ 1.51
TPM3P06753 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
TPM3P06753 AC010542.4-201ENST00000563151 1910 ntBASIC24.47■■□□□ 1.51
TPM3P06753 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TPM3P06753 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
TPM3P06753 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
TPM3P06753 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.46■■□□□ 1.51
TPM3P06753 AF131216.4-201ENST00000638924 1588 ntBASIC24.46■■□□□ 1.51
TPM3P06753 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.46■■□□□ 1.51
TPM3P06753 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TPM3P06753 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
TPM3P06753 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC24.46■■□□□ 1.51
TPM3P06753 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
TPM3P06753 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TPM3P06753 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
TPM3P06753 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
TPM3P06753 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
TPM3P06753 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
TPM3P06753 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
TPM3P06753 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
TPM3P06753 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
TPM3P06753 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
TPM3P06753 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
TPM3P06753 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.45■■□□□ 1.5
TPM3P06753 AC087742.1-201ENST00000575880 1738 ntBASIC24.45■■□□□ 1.5
TPM3P06753 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.45■■□□□ 1.5
TPM3P06753 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.45■■□□□ 1.5
TPM3P06753 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
TPM3P06753 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.45■■□□□ 1.5
TPM3P06753 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TPM3P06753 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TPM3P06753 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TPM3P06753 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TPM3P06753 KRT18P60-201ENST00000312876 1297 ntBASIC24.44■■□□□ 1.5
TPM3P06753 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TPM3P06753 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TPM3P06753 THA1P-201ENST00000590384 1145 ntBASIC24.44■■□□□ 1.5
TPM3P06753 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TPM3P06753 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TPM3P06753 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TPM3P06753 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.43■■□□□ 1.5
TPM3P06753 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.43■■□□□ 1.5
TPM3P06753 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.43■■□□□ 1.5
TPM3P06753 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TPM3P06753 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TPM3P06753 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
TPM3P06753 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TPM3P06753 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TPM3P06753 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 KRT18P24-201ENST00000344739 1156 ntBASIC24.42■■□□□ 1.5
TPM3P06753 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
TPM3P06753 MIR4281-201ENST00000580852 62 ntBASIC24.42■■□□□ 1.5
TPM3P06753 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.42■■□□□ 1.5
TPM3P06753 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.42■■□□□ 1.5
TPM3P06753 AC005229.4-201ENST00000610085 2198 ntBASIC24.42■■□□□ 1.5
TPM3P06753 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TPM3P06753 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.42■■□□□ 1.5
TPM3P06753 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms