Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 AL137784.2-201ENST00000607332 1000 ntBASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 AC105233.4-201ENST00000642045 216 ntBASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G3Q9Y6M4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 KRT18P14-201ENST00000534205 1250 ntBASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G3Q9Y6M4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 IKBKGP1-201ENST00000612193 1073 ntBASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 RARRES2P11-201ENST00000635158 484 ntBASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 AC068587.7-201ENST00000641602 218 ntBASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G3Q9Y6M4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 NTF6G-201ENST00000591094 616 ntBASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G3Q9Y6M4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G3Q9Y6M4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G3Q9Y6M4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 AC092437.1-201ENST00000624794 1048 ntBASIC21.57■■□□□ 1.04
CSNK1G3Q9Y6M4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G3Q9Y6M4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms