Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 RAI1YGL246C 1164 nt5.18□□□□□ -1.58
TY1B-HO13535 YOR300WYOR300W 309 nt5.18□□□□□ -1.58
TY1B-HO13535 MIS1YBR084W 2928 nt5.18□□□□□ -1.58
TY1B-HO13535 LEU1YGL009C 2340 nt5.17□□□□□ -1.58
TY1B-HO13535 RPS9BYBR189W 588 nt5.17□□□□□ -1.58
TY1B-HO13535 INO80YGL150C 4470 nt5.17□□□□□ -1.58
TY1B-HO13535 UPS3YDR185C 540 nt5.16□□□□□ -1.58
TY1B-HO13535 COX14YML129C 213 nt5.16□□□□□ -1.58
TY1B-HO13535 CHL4YDR254W 1377 nt5.16□□□□□ -1.58
TY1B-HO13535 UBA2YDR390C 1911 nt5.15□□□□□ -1.58
TY1B-HO13535 HSP42YDR171W 1128 nt5.15□□□□□ -1.58
TY1B-HO13535 SUE1YPR151C 621 nt5.15□□□□□ -1.58
TY1B-HO13535 RAD53YPL153C 2466 nt5.15□□□□□ -1.59
TY1B-HO13535 SET5YHR207C 1581 nt5.15□□□□□ -1.59
TY1B-HO13535 PAP1YKR002W 1707 nt5.14□□□□□ -1.59
TY1B-HO13535 PAN5YHR063C 1140 nt5.14□□□□□ -1.59
TY1B-HO13535 REC104YHR157W 549 nt5.14□□□□□ -1.59
TY1B-HO13535 IRC9YJL142C 393 nt5.14□□□□□ -1.59
TY1B-HO13535 NAT3YPR131C 588 nt5.14□□□□□ -1.59
TY1B-HO13535 ARR1YPR199C 885 nt5.14□□□□□ -1.59
TY1B-HO13535 SPT15YER148W 723 nt5.13□□□□□ -1.59
TY1B-HO13535 BUD27YFL023W 2391 nt5.13□□□□□ -1.59
TY1B-HO13535 YGL108CYGL108C 423 nt5.13□□□□□ -1.59
TY1B-HO13535 UTP9YHR196W 1728 nt5.13□□□□□ -1.59
TY1B-HO13535 IRC18YJL037W 675 nt5.13□□□□□ -1.59
TY1B-HO13535 RSE1YML049C 4086 nt5.13□□□□□ -1.59
TY1B-HO13535 YMR317WYMR317W 3423 nt5.13□□□□□ -1.59
TY1B-HO13535 TCB2YNL087W 3537 nt5.13□□□□□ -1.59
TY1B-HO13535 TAH18YPR048W 1872 nt5.12□□□□□ -1.59
TY1B-HO13535 ECM32YER176W 3366 nt5.12□□□□□ -1.59
TY1B-HO13535 YKL050CYKL050C 2769 nt5.12□□□□□ -1.59
TY1B-HO13535 YGR053CYGR053C 852 nt5.12□□□□□ -1.59
TY1B-HO13535 YLR156WYLR156W 345 nt5.12□□□□□ -1.59
TY1B-HO13535 YLR159WYLR159W 345 nt5.12□□□□□ -1.59
TY1B-HO13535 YLR161WYLR161W 345 nt5.12□□□□□ -1.59
TY1B-HO13535 snR42snR42 351 nt5.12□□□□□ -1.59
TY1B-HO13535 ASN1YPR145W 1719 nt5.12□□□□□ -1.59
TY1B-HO13535 AIM17YHL021C 1398 nt5.12□□□□□ -1.59
TY1B-HO13535 BUB1YGR188C 3066 nt5.11□□□□□ -1.59
TY1B-HO13535 NKP1YDR383C 717 nt5.11□□□□□ -1.59
TY1B-HO13535 SHO1YER118C 1104 nt5.11□□□□□ -1.59
TY1B-HO13535 tK(UUU)DtK(UUU)D 73 nt5.11□□□□□ -1.59
TY1B-HO13535 tK(UUU)G1tK(UUU)G1 73 nt5.11□□□□□ -1.59
TY1B-HO13535 tK(UUU)G2tK(UUU)G2 73 nt5.11□□□□□ -1.59
TY1B-HO13535 tK(UUU)KtK(UUU)K 73 nt5.11□□□□□ -1.59
TY1B-HO13535 tK(UUU)LtK(UUU)L 73 nt5.11□□□□□ -1.59
TY1B-HO13535 tK(UUU)OtK(UUU)O 73 nt5.11□□□□□ -1.59
TY1B-HO13535 tK(UUU)PtK(UUU)P 73 nt5.11□□□□□ -1.59
TY1B-HO13535 YOR387CYOR387C 621 nt5.11□□□□□ -1.59
TY1B-HO13535 NOP4YPL043W 2058 nt5.1□□□□□ -1.59
TY1B-HO13535 CDC26YFR036W 375 nt5.1□□□□□ -1.59
TY1B-HO13535 ECM34YHL043W 513 nt5.1□□□□□ -1.59
TY1B-HO13535 YIL054WYIL054W 318 nt5.1□□□□□ -1.59
TY1B-HO13535 RPL8BYLL045C 771 nt5.1□□□□□ -1.59
TY1B-HO13535 YBL039W-BYBL039W-B 180 nt5.1□□□□□ -1.59
TY1B-HO13535 TMA10YLR327C 261 nt5.09□□□□□ -1.59
TY1B-HO13535 YBR126W-AYBR126W-A 207 nt5.09□□□□□ -1.59
TY1B-HO13535 ATG11YPR049C 3537 nt5.09□□□□□ -1.59
TY1B-HO13535 BMH2YDR099W 822 nt5.09□□□□□ -1.6
TY1B-HO13535 YJL218WYJL218W 591 nt5.09□□□□□ -1.6
TY1B-HO13535 NRM1YNR009W 750 nt5.09□□□□□ -1.6
TY1B-HO13535 MDM12YOL009C 816 nt5.09□□□□□ -1.6
TY1B-HO13535 ELM1YKL048C 1923 nt5.08□□□□□ -1.6
TY1B-HO13535 MRP13YGR084C 1020 nt5.08□□□□□ -1.6
TY1B-HO13535 PCA1YBR295W 3651 nt5.07□□□□□ -1.6
TY1B-HO13535 PHM8YER037W 966 nt5.07□□□□□ -1.6
TY1B-HO13535 RPL34AYER056C-A 366 nt5.07□□□□□ -1.6
TY1B-HO13535 EMW1YNL313C 2715 nt5.07□□□□□ -1.6
TY1B-HO13535 APC11YDL008W 498 nt5.06□□□□□ -1.6
TY1B-HO13535 FAD1YDL045C 921 nt5.06□□□□□ -1.6
TY1B-HO13535 YPT7YML001W 627 nt5.06□□□□□ -1.6
TY1B-HO13535 MOT2YER068W 1764 nt5.06□□□□□ -1.6
TY1B-HO13535 PAP2YOL115W 1755 nt5.06□□□□□ -1.6
TY1B-HO13535 RHO3YIL118W 696 nt5.06□□□□□ -1.6
TY1B-HO13535 GOT1YMR292W 417 nt5.06□□□□□ -1.6
TY1B-HO13535 YNL320WYNL320W 855 nt5.06□□□□□ -1.6
TY1B-HO13535 TRP4YDR354W 1143 nt5.05□□□□□ -1.6
TY1B-HO13535 ORC1YML065W 2745 nt5.05□□□□□ -1.6
TY1B-HO13535 MEC3YLR288C 1425 nt5.05□□□□□ -1.6
TY1B-HO13535 GAC1YOR178C 2382 nt5.04□□□□□ -1.6
TY1B-HO13535 UTP23YOR004W 765 nt5.04□□□□□ -1.6
TY1B-HO13535 YND1YER005W 1893 nt5.04□□□□□ -1.6
TY1B-HO13535 SMC3YJL074C 3693 nt5.04□□□□□ -1.6
TY1B-HO13535 KIC1YHR102W 3243 nt5.04□□□□□ -1.6
TY1B-HO13535 HAT2YEL056W 1206 nt5.04□□□□□ -1.6
TY1B-HO13535 MED7YOL135C 669 nt5.04□□□□□ -1.6
TY1B-HO13535 MED4YOR174W 855 nt5.04□□□□□ -1.6
TY1B-HO13535 Q0010Q0010 387 nt5.03□□□□□ -1.6
TY1B-HO13535 PBP2YBR233W 1242 nt5.03□□□□□ -1.6
TY1B-HO13535 VMA1YDL185W 3216 nt5.02□□□□□ -1.61
TY1B-HO13535 DUR1,2YBR208C 5508 nt5.02□□□□□ -1.61
TY1B-HO13535 DNA2YHR164C 4569 nt5.02□□□□□ -1.61
TY1B-HO13535 GRX4YER174C 735 nt5.02□□□□□ -1.61
TY1B-HO13535 RDL2YOR286W 450 nt5.02□□□□□ -1.61
TY1B-HO13535 PRP40YKL012W 1752 nt5.02□□□□□ -1.61
TY1B-HO13535 YHR202WYHR202W 1809 nt5.02□□□□□ -1.61
TY1B-HO13535 tQ(UUG)BtQ(UUG)B 72 nt5.01□□□□□ -1.61
TY1B-HO13535 YHL026CYHL026C 948 nt5.01□□□□□ -1.61
TY1B-HO13535 YRA2YKL214C 612 nt5.01□□□□□ -1.61
TY1B-HO13535 URA7YBL039C 1740 nt5.01□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms