Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRGV1A0A0A0MS02 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRGV1A0A0A0MS02 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRGV1A0A0A0MS02 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.02■□□□□ 0.15
TRGV1A0A0A0MS02 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TRGV1A0A0A0MS02 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 GUSBP5-201ENST00000418136 578 ntBASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.01■□□□□ 0.15
TRGV1A0A0A0MS02 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 LINC01529-204ENST00000636474 1715 ntBASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 GRAMD4P7-201ENST00000578182 1232 ntBASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 AC009102.2-201ENST00000606772 1639 ntBASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16■□□□□ 0.15
TRGV1A0A0A0MS02 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 C1orf229-201ENST00000623686 2258 ntBASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRGV1A0A0A0MS02 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRGV1A0A0A0MS02 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 FP325331.1-202ENST00000623531 1380 ntBASIC15.97■□□□□ 0.15
TRGV1A0A0A0MS02 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms