Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH20Q9HBT6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CDH20Q9HBT6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CDH20Q9HBT6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CDH20Q9HBT6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CDH20Q9HBT6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.51■□□□□ 0.71
CDH20Q9HBT6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH20Q9HBT6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CDH20Q9HBT6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH20Q9HBT6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH20Q9HBT6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH20Q9HBT6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CDH20Q9HBT6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 AC008406.3-201ENST00000620001 1374 ntBASIC19.5■□□□□ 0.71
CDH20Q9HBT6 AC131281.2-201ENST00000520478 145 ntBASIC19.5■□□□□ 0.71
CDH20Q9HBT6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDH20Q9HBT6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 SRD5A1P1-201ENST00000442297 786 ntBASIC19.49■□□□□ 0.71
CDH20Q9HBT6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDH20Q9HBT6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 AL512631.2-201ENST00000604634 923 ntBASIC19.48■□□□□ 0.71
CDH20Q9HBT6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDH20Q9HBT6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.47■□□□□ 0.71
CDH20Q9HBT6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDH20Q9HBT6 C17orf82-201ENST00000623772 1530 ntBASIC19.46■□□□□ 0.71
CDH20Q9HBT6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 AL136116.3-201ENST00000402907 1138 ntBASIC19.46■□□□□ 0.71
CDH20Q9HBT6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDH20Q9HBT6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDH20Q9HBT6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms