Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 MIR3181-201ENST00000578512 73 ntBASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNAP47Q5SQN1 AC133561.1-201ENST00000568600 2415 ntBASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 AC099791.1-201ENST00000416440 715 ntBASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 AC027682.1-201ENST00000562846 899 ntBASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 pRNA.6-201ENST00000610482 90 ntBASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 pRNA.5-201ENST00000612139 90 ntBASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 pRNA.11-201ENST00000618423 90 ntBASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 pRNA.13-201ENST00000619112 90 ntBASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNAP47Q5SQN1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 RASA4CP-201ENST00000424092 1398 ntBASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNAP47Q5SQN1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 AC136469.2-201ENST00000623944 1028 ntBASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNAP47Q5SQN1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNAP47Q5SQN1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.65■■□□□ 1.06
SNAP47Q5SQN1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.65■■□□□ 1.06
SNAP47Q5SQN1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SNAP47Q5SQN1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SNAP47Q5SQN1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SNAP47Q5SQN1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SNAP47Q5SQN1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.64■■□□□ 1.05
SNAP47Q5SQN1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.64■■□□□ 1.05
SNAP47Q5SQN1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SNAP47Q5SQN1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAP47Q5SQN1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNAP47Q5SQN1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SNAP47Q5SQN1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNAP47Q5SQN1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.62■■□□□ 1.05
SNAP47Q5SQN1 AC141586.4-201ENST00000624558 1573 ntBASIC21.61■■□□□ 1.05
SNAP47Q5SQN1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms